RNA–Protein interactions for RNA: ENST00000616170.4

SH3GLB1-205, Transcript of SH3 domain containing GRB2 like, endophilin B1, humanhuman

TSL 1 (best) BASIC

Gene SH3GLB1, Length 6,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GLB1-205ENST00000616170 GRB7Q14451 532 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 TBC1D3GQ6DHY5 549 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 TBC1D3CQ6IPX1 549 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 SLC8B1Q6J4K2 584 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 RBM12BQ8IXT5 1001 aaKnown RBP9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 TBC1D3Q8IZP1 549 aaPredicted RBP9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 C1orf52Q8N6N3 182 aaKnown RBP9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 NRG4Q8WWG1 115 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 GEMIN6Q8WXD5 167 aaKnown RBP9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 HTATIP2Q9BUP3 242 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 PLEKHA1Q9HB21 404 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 FARSBQ9NSD9 589 aaKnown RBP9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 VPS29Q9UBQ0 182 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 TOXO94900 526 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 GBX2P52951 348 aaPredicted RBP9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 SLC13A2Q13183 592 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 KCNAB2Q13303 367 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 TUBA3CQ13748 450 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 SEMA3AQ14563 771 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 TIFABQ6ZNK6 161 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 NSUN5Q96P11 429 aaKnown RBP9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 MRIQ9BWK5 157 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 UCK2Q9BZX2 261 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 CHMP1AQ9HD42 196 aaPredicted RBP9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 ENAMQ9NRM1 1142 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 STOX2Q9P2F5 926 aaPredicted RBP9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 FARSAQ9Y285 508 aaKnown RBP9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 COL1A2P08123 1366 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 C13orf42A0A1B0GVH6 325 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 SH3PXD2BA1X283 911 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 PRPS1L1P21108 318 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 GRK5P34947 590 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 EIF2S3P41091 472 aaKnown RBP9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 NANOGP8Q6NSW7 305 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 SYNPOQ8N3V7 929 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 OR5J2Q8NH18 312 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 NANOGQ9H9S0 305 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 PTPRJQ12913 1337 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 HAS3O00219 553 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 CHP2O43745 196 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 PRAMEF12O95522 483 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 KCNA5P22460 613 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 S100A10P60903 97 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 ATXN7L3Q14CW9 347 aaPredicted RBP9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 GPR68Q15743 365 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 HSDL2Q6YN16 418 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 RGL4Q8IZJ4 473 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 OR8S1Q8NH09 359 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 MAGEH1Q9H213 219 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 METTL8Q9H825 291 aaKnown RBP9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 PCDHGA11Q9Y5H2 935 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 MYH3P11055 1940 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 OR6C75A6NL08 312 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 FAM189A1O60320 539 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 H1F0P07305 194 aaKnown RBP9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 NSG1P42857 185 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 ATP6AP1Q15904 470 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 XKR4Q5GH76 650 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 ZNF648Q5T619 568 aaPredicted RBP9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 LIPKQ5VXJ0 399 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 LNX2Q8N448 690 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 PQLC3Q8N755 202 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 COX18Q8N8Q8 333 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 ZUFSPQ96AP4 578 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 SIGLEC10Q96LC7 697 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 ALPK1Q96QP1 1244 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 USP29Q9HBJ7 922 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 SMOXQ9NWM0 555 aa9.07□□□□□ -0.96
SH3GLB1-205ENST00000616170 SLC9A3R1O14745 358 aaPredicted RBP9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 IL7P13232 177 aa9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 PORP16435 677 aaPredicted RBP9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 ALAS2P22557 587 aa9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 CRISP3P54108 245 aa9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 CEACAM7Q14002 265 aa9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 SLBPQ14493 270 aaKnown RBP eCLIP9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 UBXN11Q5T124 520 aa9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 GJD3Q8N144 294 aa9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 PIAS4Q8N2W9 510 aaPredicted RBP9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 ZNF557Q8N988 423 aaPredicted RBP9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 DDX1Q92499 740 aaKnown RBP9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 CDKN2AIPNLQ96HQ2 116 aa9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 LRCH3Q96II8 777 aa9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 GPR88Q9GZN0 384 aa9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 ABCB8Q9NUT2 735 aa9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 ZNF451Q9Y4E5 1061 aa9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 PENKP01210 267 aaPredicted RBP9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 RB1P06400 928 aa9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 RPL17P18621 184 aaKnown RBP9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 FPR1P21462 350 aa9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 HTR7P34969 479 aa9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 IGFALSP35858 605 aa9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 CLCN2P51788 898 aa9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 PGDP52209 483 aa9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 AP1S2P56377 157 aa9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 CREMQ03060 361 aa9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 MLLT1Q03111 559 aaPredicted RBP9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 PRKCDQ05655 676 aa9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 CTC1Q2NKJ3 1217 aa9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 GARNL3Q5VVW2 1013 aa9.06□□□□□ -0.96
SH3GLB1-205ENST00000616170 PSRC1Q6PGN9 363 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms