RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 TSPAN17Q96FV3 270 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 MYLK2Q9H1R3 596 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 ZNF451Q9Y4E5 1061 aa6.88□□□□□ -1.31
CBWD1-219ENST00000611457 IFRD1O00458 451 aaPredicted RBP6.87□□□□□ -1.31
CBWD1-219ENST00000611457 SOCS6O14544 535 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 SLITRK5O94991 958 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 TOP3BO95985 862 aaKnown RBP6.87□□□□□ -1.31
CBWD1-219ENST00000611457 AGAP20933 346 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 PRDX1Q06830 199 aaKnown RBP6.87□□□□□ -1.31
CBWD1-219ENST00000611457 CALCOCO2Q13137 446 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 DSG2Q14126 1118 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 LIN52Q52LA3 116 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 EXOSC6Q5RKV6 272 aaKnown RBP6.87□□□□□ -1.31
CBWD1-219ENST00000611457 ANKRD22Q5VYY1 191 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 KLC3Q6P597 504 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 CDHR3Q6ZTQ4 885 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 OVCH1Q7RTY7 1134 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 ARHGAP24Q8N264 748 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 C17orf47Q8NEP4 570 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 UHMK1Q8TAS1 419 aaKnown RBP6.87□□□□□ -1.31
CBWD1-219ENST00000611457 KLK6Q92876 244 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 CXorf40BQ96DE9 158 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 ZNF184Q99676 751 aaPredicted RBP6.87□□□□□ -1.31
CBWD1-219ENST00000611457 RBBP8Q99708 897 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 CCDC77Q9BR77 488 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 DENND2DQ9H6A0 471 aaPredicted RBP6.87□□□□□ -1.31
CBWD1-219ENST00000611457 TMEM165Q9HC07 324 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 LHX9Q9NQ69 397 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 LNPEPQ9UIQ6 1025 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 PLEKHM1Q9Y4G2 1056 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 MMACHCQ9Y4U1 282 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 CCDC22O60826 627 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 KLF7O75840 302 aaPredicted RBP6.87□□□□□ -1.31
CBWD1-219ENST00000611457 TNFSF15O95150 251 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 ZWINTO95229 277 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 NSA2O95478 260 aaKnown RBP6.87□□□□□ -1.31
CBWD1-219ENST00000611457 ACP5P13686 325 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 HOXB3P14651 431 aaPredicted RBP6.87□□□□□ -1.31
CBWD1-219ENST00000611457 AK4P27144 223 aaPredicted RBP6.87□□□□□ -1.31
CBWD1-219ENST00000611457 GABRB3P28472 473 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 GRIA3P42263 894 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 ITKQ08881 620 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 GALNT1Q10472 559 aaPredicted RBP6.87□□□□□ -1.31
CBWD1-219ENST00000611457 NFE2L1Q14494 772 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 RCN1Q15293 331 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.87□□□□□ -1.31
CBWD1-219ENST00000611457 SBSNQ6UWP8 590 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 OR2L3Q8NG85 312 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 M1APQ8TC57 530 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 LKAAEAR1Q8TD35 194 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 TFGQ92734 400 aaPredicted RBP6.87□□□□□ -1.31
CBWD1-219ENST00000611457 HDAC10Q969S8 669 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 GFM2Q969S9 779 aaKnown RBP6.87□□□□□ -1.31
CBWD1-219ENST00000611457 MIB2Q96AX9 1013 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 MTBPQ96DY7 904 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 OR2A5Q96R48 311 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 PARVBQ9HBI1 364 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 LRRC4CQ9HCJ2 640 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 SAR1AQ9NR31 198 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 SLC39A1Q9NY26 324 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 NUDT4Q9NZJ9 180 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 SENP1Q9P0U3 644 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 ITGB1BP2Q9UKP3 347 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 ZNF148Q9UQR1 794 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 PADI2Q9Y2J8 665 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 PCDHGB3Q9Y5G1 929 aa6.87□□□□□ -1.31
CBWD1-219ENST00000611457 TCRBV7S3A2A0A539 114 aa6.86□□□□□ -1.31
CBWD1-219ENST00000611457 HNRNPCP07910 306 aaKnown RBP eCLIP6.86□□□□□ -1.31
CBWD1-219ENST00000611457 CRABP2P29373 138 aa6.86□□□□□ -1.31
CBWD1-219ENST00000611457 PRDX3P30048 256 aaKnown RBP6.86□□□□□ -1.31
CBWD1-219ENST00000611457 SERPINB9P50453 376 aa6.86□□□□□ -1.31
CBWD1-219ENST00000611457 TRA2BP62995 288 aaKnown RBP6.86□□□□□ -1.31
CBWD1-219ENST00000611457 INSCQ1MX18 579 aa6.86□□□□□ -1.31
CBWD1-219ENST00000611457 FOXB2Q5VYV0 432 aa6.86□□□□□ -1.31
CBWD1-219ENST00000611457 QSOX2Q6ZRP7 698 aa6.86□□□□□ -1.31
CBWD1-219ENST00000611457 TIPARPQ7Z3E1 657 aaKnown RBP6.86□□□□□ -1.31
CBWD1-219ENST00000611457 PPP1R3BQ86XI6 285 aa6.86□□□□□ -1.31
CBWD1-219ENST00000611457 KBTBD2Q8IY47 623 aa6.86□□□□□ -1.31
CBWD1-219ENST00000611457 TMEM102Q8N9M5 508 aaPredicted RBP6.86□□□□□ -1.31
CBWD1-219ENST00000611457 OR2Y1Q8NGV0 311 aa6.86□□□□□ -1.31
CBWD1-219ENST00000611457 BLOC1S5Q8TDH9 187 aa6.86□□□□□ -1.31
CBWD1-219ENST00000611457 MZB1Q8WU39 189 aa6.86□□□□□ -1.31
CBWD1-219ENST00000611457 MCUR1Q96AQ8 359 aa6.86□□□□□ -1.31
CBWD1-219ENST00000611457 MIPEPQ99797 713 aa6.86□□□□□ -1.31
CBWD1-219ENST00000611457 HEMGNQ9BXL5 484 aa6.86□□□□□ -1.31
CBWD1-219ENST00000611457 SEMA4CQ9C0C4 833 aa6.86□□□□□ -1.31
CBWD1-219ENST00000611457 LYRM4Q9HD34 91 aa6.86□□□□□ -1.31
CBWD1-219ENST00000611457 CUEDC1Q9NWM3 386 aaPredicted RBP6.86□□□□□ -1.31
CBWD1-219ENST00000611457 RHBDL2Q9NX52 303 aa6.86□□□□□ -1.31
CBWD1-219ENST00000611457 MARCH4Q9P2E8 410 aaPredicted RBP6.86□□□□□ -1.31
CBWD1-219ENST00000611457 PTBP2Q9UKA9 531 aaKnown RBP6.86□□□□□ -1.31
CBWD1-219ENST00000611457 RARRES3Q9UL19 164 aa6.86□□□□□ -1.31
CBWD1-219ENST00000611457 ACOT9Q9Y305 439 aa6.86□□□□□ -1.31
CBWD1-219ENST00000611457 IGKV1-8A0A0C4DH67 115 aa6.86□□□□□ -1.31
CBWD1-219ENST00000611457 B4DGG1 531 aa6.86□□□□□ -1.31
CBWD1-219ENST00000611457 FOXE1O00358 373 aaPredicted RBP6.86□□□□□ -1.31
CBWD1-219ENST00000611457 SUV39H1O43463 412 aa6.86□□□□□ -1.31
CBWD1-219ENST00000611457 LYNP07948 512 aa6.86□□□□□ -1.31
CBWD1-219ENST00000611457 LIFP15018 202 aa6.86□□□□□ -1.31
CBWD1-219ENST00000611457 CSTF2P33240 577 aaKnown RBP eCLIP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms