RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 ATP5A1P25705 553 aaKnown RBP9.37□□□□□ -0.91
CSMD1-217ENST00000602723 MAPK3P27361 379 aaPredicted RBP9.37□□□□□ -0.91
CSMD1-217ENST00000602723 L1CAMP32004 1257 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 NDUFV1P49821 464 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 TMEM220Q6QAJ8 160 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 ABHD13Q7L211 337 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 OR7D4Q8NG98 312 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 TM9SF2Q99805 663 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 OR2AG1Q9H205 316 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 CTPS2Q9NRF8 586 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 CMAHPQ9Y471 501 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 LRRC42Q9Y546 428 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 LMO7Q8WWI1 1683 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 ZNF726A6NNF4 738 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 ACADVLP49748 655 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 IL10RBQ08334 325 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 CANT1Q8WVQ1 401 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 VPS29Q9UBQ0 182 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 PCDHGB6Q9Y5F9 930 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 LOC100130705A0A1B0GUX0 176 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 NFATC1O95644 943 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 CD72P21854 359 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 GADD45AP24522 165 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 SPATS1Q496A3 300 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 INTS6LQ5JSJ4 861 aaKnown RBP9.37□□□□□ -0.91
CSMD1-217ENST00000602723 DNM1P34Q6PK57 102 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 TMEM110Q86TL2 294 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 ASPNQ9BXN1 380 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 FGFBP2Q9BYJ0 223 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 ZFP37Q9Y6Q3 630 aaPredicted RBP9.37□□□□□ -0.91
CSMD1-217ENST00000602723 A8MV72 311 aaPredicted RBP9.37□□□□□ -0.91
CSMD1-217ENST00000602723 ITGA5P08648 1049 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 CASP7P55210 303 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 CD47Q08722 323 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 RBM23Q86U06 439 aaKnown RBP9.37□□□□□ -0.91
CSMD1-217ENST00000602723 ZNF598Q86UK7 904 aaKnown RBP9.37□□□□□ -0.91
CSMD1-217ENST00000602723 MTFR1LQ9H019 292 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 AKTIPQ9H8T0 292 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 ABI3Q9P2A4 366 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 CLIC1O00299 241 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 NUDT13Q86X67 352 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 SLC25A36Q96CQ1 311 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 TFB2MQ9H5Q4 396 aaKnown RBP9.37□□□□□ -0.91
CSMD1-217ENST00000602723 GSKIPQ9P0R6 139 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 FZD4Q9ULV1 537 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 FZD10Q9ULW2 581 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 MAB21L2Q9Y586 359 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 PCDHGC4Q9Y5F7 938 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 COL5A2P05997 1499 aaPredicted RBP9.37□□□□□ -0.91
CSMD1-217ENST00000602723 TUBG1P23258 451 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 ZNF773Q6PK81 442 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 AMZ2Q86W34 360 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 CGREF1Q99674 301 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 CNTN3Q9P232 1028 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 FAM198AQ9UFP1 575 aa9.37□□□□□ -0.91
CSMD1-217ENST00000602723 H3BSA7 217 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 TSPAN1O60635 241 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 CDRT1O95170 752 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 CXCL14O95715 111 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 VARSP26640 1264 aaKnown RBP9.36□□□□□ -0.91
CSMD1-217ENST00000602723 GDF10P55107 478 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 SHKBP1Q8TBC3 707 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 PSMG2Q969U7 264 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 COL21A1Q96P44 957 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 PSKH2Q96QS6 385 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 J3QLW9 94 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 TLL1O43897 1013 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 LYPLA2O95372 231 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 CREB1P16220 341 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 ZNF19P17023 458 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 CKMT2P17540 419 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 CYP1B1Q16678 543 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 ZNF404Q494X3 552 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 TBL1XR1Q9BZK7 514 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 ALKBH4Q9NXW9 302 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 TMEM9Q9P0T7 183 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 KCNN3Q9UGI6 736 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 SMIM28A0A1B0GU29 152 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 DISC1C4P0D8 188 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 AGPSO00116 658 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 AGR2O95994 175 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 HCKP08631 526 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 CHRNB2P17787 502 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 HSD17B2P37059 387 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 CLCNKBP51801 687 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 RPP38P78345 283 aaKnown RBP9.36□□□□□ -0.91
CSMD1-217ENST00000602723 MOGQ16653 247 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 HSDL1Q3SXM5 330 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 SCP2D1Q9UJQ7 156 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 C4BPAP04003 597 aaKnown RBP9.36□□□□□ -0.91
CSMD1-217ENST00000602723 IMPDH1P20839 514 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 RPS3P23396 243 aaKnown RBP eCLIP9.36□□□□□ -0.91
CSMD1-217ENST00000602723 HSD3B2P26439 372 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 NUDT6P53370 316 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 RPS3AP61247 264 aaKnown RBP9.36□□□□□ -0.91
CSMD1-217ENST00000602723 MAD2L1BPQ15013 274 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-217ENST00000602723 GPR68Q15743 365 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 DUOXA1Q1HG43 343 aa9.36□□□□□ -0.91
CSMD1-217ENST00000602723 DRICH1Q6PGQ1 229 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-217ENST00000602723 ABHD15Q6UXT9 468 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms