RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 ENPP3O14638 875 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 HMGB3O15347 200 aaKnown RBP8.49□□□□□ -1.05
CSMD1-216ENST00000602557 TGM4P49221 684 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 DCST1Q5T197 706 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 BEND5Q7L4P6 421 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 ATAD1Q8NBU5 361 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 OR8S1Q8NH09 359 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 CPT1BQ92523 772 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 PCDHGA7Q9Y5G6 932 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 IRS2Q9Y4H2 1338 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 TCAF2A6NFQ2 919 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 TMEM233B4DJY2 109 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 VAMP1P23763 118 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 NMBRP28336 390 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 CRYBB1P53674 252 aaPredicted RBP8.49□□□□□ -1.05
CSMD1-216ENST00000602557 IGFN1Q86VF2 1251 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 RANBP3LQ86VV4 465 aaPredicted RBP8.49□□□□□ -1.05
CSMD1-216ENST00000602557 TMC8Q8IU68 726 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 TMEM151AQ8N4L1 468 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 SPATA22Q8NHS9 363 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 DNAJC27Q9NZQ0 273 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 CD48P09326 243 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 ANXA4P09525 319 aaPredicted RBP8.49□□□□□ -1.05
CSMD1-216ENST00000602557 AIF1P55008 147 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 ESPL1Q14674 2120 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 CLEC12AQ5QGZ9 265 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 MFSD2AQ8NA29 543 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 SIDT2Q8NBJ9 832 aaKnown RBP8.49□□□□□ -1.05
CSMD1-216ENST00000602557 C1orf216Q8TAB5 229 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 JSRP1Q96MG2 331 aaPredicted RBP8.49□□□□□ -1.05
CSMD1-216ENST00000602557 MTERF1Q99551 399 aaKnown RBP8.49□□□□□ -1.05
CSMD1-216ENST00000602557 RC3H2Q9HBD1 1191 aaKnown RBP8.49□□□□□ -1.05
CSMD1-216ENST00000602557 C1orf109Q9NX04 203 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 MIOSQ9NXC5 875 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 DNAJB9Q9UBS3 223 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 TGFB1I1O43294 461 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 NDST3O95803 873 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 C8BP07358 591 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 HSPA7P48741 367 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 EIF5AP63241 154 aaKnown RBP8.49□□□□□ -1.05
CSMD1-216ENST00000602557 C2orf80Q0P641 193 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 PMS2P3Q13401 168 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 CARD16Q5EG05 197 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 SLC15A3Q8IY34 581 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 CASTOR1Q8WTX7 329 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 PCNPQ8WW12 178 aaKnown RBP8.49□□□□□ -1.05
CSMD1-216ENST00000602557 ROPN1LQ96C74 230 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 GATA5Q9BWX5 397 aaPredicted RBP8.49□□□□□ -1.05
CSMD1-216ENST00000602557 FBXW2Q9UKT8 454 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 XKP51811 444 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 ABCA11PQ4W5N1 156 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 HEXDCQ8WVB3 486 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 ASB9Q96DX5 294 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 KIAA1522Q9P206 1035 aaPredicted RBP8.49□□□□□ -1.05
CSMD1-216ENST00000602557 TCAF1Q9Y4C2 921 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 MON2Q7Z3U7 1717 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 ENTPD6O75354 484 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 CLDN11O75508 207 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 MAP2K3P46734 347 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 MC2RQ01718 297 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 PRKCZQ05513 592 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 SLC10A7Q0GE19 358 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 TREML2Q5T2D2 321 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 FAM198BQ6UWH4 519 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 GPALPP1Q8IXQ4 340 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 UNC5BQ8IZJ1 945 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 FIBCD1Q8N539 461 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 TRPS1Q9UHF7 1281 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 DNMT3AQ9Y6K1 912 aaPredicted RBP8.49□□□□□ -1.05
CSMD1-216ENST00000602557 ARL5CA6NH57 179 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 OR6C65A6NJZ3 312 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 TNFRSF10AO00220 468 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 CD247P20963 164 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 SLC3A1Q07837 685 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 ZNF767PQ75MW2 155 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 ERMP1Q7Z2K6 904 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 Q8N402 240 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 LRRC52Q8N7C0 313 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 OR5T1Q8NG75 326 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 OR2L8Q8NGY9 312 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 TMIGD2Q96BF3 282 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 LMLNQ96KR4 655 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 EVA1BQ9NVM1 165 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 HEMK1Q9Y5R4 338 aaPredicted RBP8.49□□□□□ -1.05
CSMD1-216ENST00000602557 PTPRJQ12913 1337 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 CCL16O15467 120 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 GNRH1P01148 92 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 HK1P19367 917 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 HTR2AP28223 471 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 PRMT2P55345 433 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 PRR5P85299 388 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 TLDC1Q6P9B6 456 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 LCLAT1Q6UWP7 414 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 TMEM199Q8N511 208 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 WDSUB1Q8N9V3 476 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 PRRG4Q9BZD6 226 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 PPA2Q9H2U2 334 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 PCDHGA11Q9Y5H2 935 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 KLRG2A4D1S0 409 aaPredicted RBP8.49□□□□□ -1.05
CSMD1-216ENST00000602557 ZNF705FA8MVS1 300 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms