RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 LHPPQ9H008 270 aa15.05■□□□□ -0
VRK3-221ENST00000600284 ILKAPQ9H0C8 392 aaPredicted RBP15.05■□□□□ -0
VRK3-221ENST00000600284 DDX47Q9H0S4 455 aaKnown RBP15.05■□□□□ -0
VRK3-221ENST00000600284 TMEM184CQ9NVA4 438 aa15.05■□□□□ -0
VRK3-221ENST00000600284 C14orf105Q9NVL8 296 aa15.05■□□□□ -0
VRK3-221ENST00000600284 TRMT1Q9NXH9 659 aaKnown RBP15.05■□□□□ -0
VRK3-221ENST00000600284 RUVBL1Q9Y265 456 aaKnown RBP15.05■□□□□ -0
VRK3-221ENST00000600284 COL12A1Q99715 3063 aa15.04■□□□□ -0
VRK3-221ENST00000600284 PTPN13Q12923 2485 aa15.04■□□□□ -0
VRK3-221ENST00000600284 KCNE1BA0A087WTH5 132 aa15.04■□□□□ -0
VRK3-221ENST00000600284 MASP2O00187 686 aa15.04■□□□□ -0
VRK3-221ENST00000600284 SLC16A5O15375 505 aa15.04■□□□□ -0
VRK3-221ENST00000600284 HPP00738 406 aa15.04■□□□□ -0
VRK3-221ENST00000600284 IVDP26440 423 aa15.04■□□□□ -0
VRK3-221ENST00000600284 SLC26A3P40879 764 aa15.04■□□□□ -0
VRK3-221ENST00000600284 TIAL1Q01085 375 aaKnown RBP eCLIP15.04■□□□□ -0
VRK3-221ENST00000600284 SP140Q13342 867 aa15.04■□□□□ -0
VRK3-221ENST00000600284 NDUFA9Q16795 377 aa15.04■□□□□ -0
VRK3-221ENST00000600284 CRB2Q5IJ48 1285 aa15.04■□□□□ -0
VRK3-221ENST00000600284 THEMIS2Q5TEJ8 643 aa15.04■□□□□ -0
VRK3-221ENST00000600284 PIWIL4Q7Z3Z4 852 aaKnown RBP15.04■□□□□ -0
VRK3-221ENST00000600284 PALM2Q8IXS6 379 aa15.04■□□□□ -0
VRK3-221ENST00000600284 ARHGEF39Q8N4T4 335 aa15.04■□□□□ -0
VRK3-221ENST00000600284 DTWD1Q8N5C7 304 aa15.04■□□□□ -0
VRK3-221ENST00000600284 PPP4R1Q8TF05 950 aa15.04■□□□□ -0
VRK3-221ENST00000600284 EEF1AKMT1Q8WVE0 214 aa15.04■□□□□ -0
VRK3-221ENST00000600284 SNRNP40Q96DI7 357 aaKnown RBP15.04■□□□□ -0
VRK3-221ENST00000600284 THAP11Q96EK4 314 aa15.04■□□□□ -0
VRK3-221ENST00000600284 KCNF1Q9H3M0 494 aa15.04■□□□□ -0
VRK3-221ENST00000600284 PARVBQ9HBI1 364 aa15.04■□□□□ -0
VRK3-221ENST00000600284 MKKSQ9NPJ1 570 aaPredicted RBP15.04■□□□□ -0
VRK3-221ENST00000600284 CCDC177Q9NQR7 707 aaPredicted RBP15.04■□□□□ -0
VRK3-221ENST00000600284 LUZP4Q9P127 313 aa15.04■□□□□ -0
VRK3-221ENST00000600284 C3orf18Q9UK00 162 aa15.04■□□□□ -0
VRK3-221ENST00000600284 DOPEY2Q9Y3R5 2298 aa15.04■□□□□ -0
VRK3-221ENST00000600284 A0A1W2PQ72 361 aa15.03■□□□□ -0
VRK3-221ENST00000600284 TCP11X1B4DZS4 312 aa15.03■□□□□ -0
VRK3-221ENST00000600284 H7BY64 318 aa15.03■□□□□ -0
VRK3-221ENST00000600284 MAP2K7O14733 419 aa15.03■□□□□ -0
VRK3-221ENST00000600284 FOXS1O43638 330 aa15.03■□□□□ -0
VRK3-221ENST00000600284 AHSGP02765 367 aa15.03■□□□□ -0
VRK3-221ENST00000600284 ANXA5P08758 320 aa15.03■□□□□ -0
VRK3-221ENST00000600284 GP1BBP13224 206 aa15.03■□□□□ -0
VRK3-221ENST00000600284 ACPPP15309 386 aa15.03■□□□□ -0
VRK3-221ENST00000600284 CCND1P24385 295 aa15.03■□□□□ -0
VRK3-221ENST00000600284 GABRB3P28472 473 aa15.03■□□□□ -0
VRK3-221ENST00000600284 MORF4L2Q15014 288 aa15.03■□□□□ -0
VRK3-221ENST00000600284 HKDC1Q2TB90 917 aa15.03■□□□□ -0
VRK3-221ENST00000600284 PRR30Q53SZ7 412 aaPredicted RBP15.03■□□□□ -0
VRK3-221ENST00000600284 VWA2Q5GFL6 755 aa15.03■□□□□ -0
VRK3-221ENST00000600284 ADCK2Q7Z695 626 aa15.03■□□□□ -0
VRK3-221ENST00000600284 PARP9Q8IXQ6 854 aa15.03■□□□□ -0
VRK3-221ENST00000600284 PDIK1LQ8N165 341 aa15.03■□□□□ -0
VRK3-221ENST00000600284 MYO1HQ8N1T3 1032 aa15.03■□□□□ -0
VRK3-221ENST00000600284 LRRC39Q96DD0 335 aa15.03■□□□□ -0
VRK3-221ENST00000600284 MMABQ96EY8 250 aaPredicted RBP15.03■□□□□ -0
VRK3-221ENST00000600284 CERS2Q96G23 380 aa15.03■□□□□ -0
VRK3-221ENST00000600284 PRAP1Q96NZ9 151 aa15.03■□□□□ -0
VRK3-221ENST00000600284 LMF1Q96S06 567 aa15.03■□□□□ -0
VRK3-221ENST00000600284 WDR77Q9BQA1 342 aaPredicted RBP15.03■□□□□ -0
VRK3-221ENST00000600284 FAM129AQ9BZQ8 928 aa15.03■□□□□ -0
VRK3-221ENST00000600284 DRC3Q9H069 523 aa15.03■□□□□ -0
VRK3-221ENST00000600284 SYNPO2LQ9H987 977 aa15.03■□□□□ -0
VRK3-221ENST00000600284 ZBTB20Q9HC78 741 aaPredicted RBP15.03■□□□□ -0
VRK3-221ENST00000600284 CUEDC1Q9NWM3 386 aaPredicted RBP15.03■□□□□ -0
VRK3-221ENST00000600284 STOX2Q9P2F5 926 aaPredicted RBP15.03■□□□□ -0
VRK3-221ENST00000600284 TRPC4Q9UBN4 977 aa15.03■□□□□ -0
VRK3-221ENST00000600284 CORO1CQ9ULV4 474 aaPredicted RBP15.03■□□□□ -0
VRK3-221ENST00000600284 PDE10AQ9Y233 779 aa15.03■□□□□ -0
VRK3-221ENST00000600284 NUP210LQ5VU65 1888 aa15.02■□□□□ -0
VRK3-221ENST00000600284 HAT1O14929 419 aa15.02■□□□□ -0
VRK3-221ENST00000600284 AGFG2O95081 481 aa15.02■□□□□ -0
VRK3-221ENST00000600284 FDXRP22570 491 aa15.02■□□□□ -0
VRK3-221ENST00000600284 CXCR2P25025 360 aa15.02■□□□□ -0
VRK3-221ENST00000600284 EMP2P54851 167 aa15.02■□□□□ -0
VRK3-221ENST00000600284 RPS15AP62244 130 aaKnown RBP15.02■□□□□ -0
VRK3-221ENST00000600284 BBS9Q3SYG4 887 aa15.02■□□□□ -0
VRK3-221ENST00000600284 MSS51Q4VC12 460 aa15.02■□□□□ -0
VRK3-221ENST00000600284 TEDDM1Q5T9Z0 273 aa15.02■□□□□ -0
VRK3-221ENST00000600284 PAQR3Q6TCH7 311 aa15.02■□□□□ -0
VRK3-221ENST00000600284 NDUFAF7Q7L592 441 aa15.02■□□□□ -0
VRK3-221ENST00000600284 CISD2Q8N5K1 135 aaKnown RBP15.02■□□□□ -0
VRK3-221ENST00000600284 AMER3Q8N944 861 aa15.02■□□□□ -0
VRK3-221ENST00000600284 THOC3Q96J01 351 aaKnown RBP15.02■□□□□ -0
VRK3-221ENST00000600284 NDNQ99608 321 aa15.02■□□□□ -0
VRK3-221ENST00000600284 BARD1Q99728 777 aaKnown RBP15.02■□□□□ -0
VRK3-221ENST00000600284 EPS8L2Q9H6S3 715 aa15.02■□□□□ -0
VRK3-221ENST00000600284 ABCF3Q9NUQ8 709 aa15.02■□□□□ -0
VRK3-221ENST00000600284 MAP10Q9P2G4 905 aa15.02■□□□□ -0
VRK3-221ENST00000600284 ADAMTS6Q9UKP5 1117 aa15.02■□□□□ -0
VRK3-221ENST00000600284 PCDHGA10Q9Y5H3 936 aa15.02■□□□□ -0
VRK3-221ENST00000600284 COPG1Q9Y678 874 aaKnown RBP15.02■□□□□ -0
VRK3-221ENST00000600284 SHANK1Q9Y566 2161 aa15.02□□□□□ -0.01
VRK3-221ENST00000600284 HEATR5BQ9P2D3 2071 aa15.02□□□□□ -0.01
VRK3-221ENST00000600284 LRRK2Q5S007 2527 aa15.02□□□□□ -0.01
VRK3-221ENST00000600284 RP1L1Q8IWN7 2480 aaPredicted RBP15.02□□□□□ -0.01
VRK3-221ENST00000600284 IDSB3KWA1 339 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 H0YIG0 161 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 ALOX12BO75342 701 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 HIST1H2AGP0C0S8 130 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms