RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 FBXO8Q9NRD0 319 aa21.22■□□□□ 0.99
CHMP2A-204ENST00000597848 RARRES3Q9UL19 164 aa21.22■□□□□ 0.99
CHMP2A-204ENST00000597848 PLCL2Q9UPR0 1127 aa21.22■□□□□ 0.99
CHMP2A-204ENST00000597848 MSRB2Q9Y3D2 182 aa21.22■□□□□ 0.99
CHMP2A-204ENST00000597848 AK5Q9Y6K8 562 aa21.22■□□□□ 0.99
CHMP2A-204ENST00000597848 TMEM150CB9EJG8 249 aa21.21■□□□□ 0.99
CHMP2A-204ENST00000597848 HAT1O14929 419 aa21.21■□□□□ 0.99
CHMP2A-204ENST00000597848 VARSP26640 1264 aaKnown RBP21.21■□□□□ 0.99
CHMP2A-204ENST00000597848 PIK3CGP48736 1102 aa21.21■□□□□ 0.99
CHMP2A-204ENST00000597848 HERVK_113P63132 956 aa21.21■□□□□ 0.99
CHMP2A-204ENST00000597848 MEF2AQ02078 507 aaPredicted RBP21.21■□□□□ 0.99
CHMP2A-204ENST00000597848 XKR6Q5GH73 641 aa21.21■□□□□ 0.99
CHMP2A-204ENST00000597848 METTL2BQ6P1Q9 378 aaKnown RBP21.21■□□□□ 0.99
CHMP2A-204ENST00000597848 FBXO42Q6P3S6 717 aa21.21■□□□□ 0.99
CHMP2A-204ENST00000597848 SLCO4C1Q6ZQN7 724 aa21.21■□□□□ 0.99
CHMP2A-204ENST00000597848 GOLGA7Q7Z5G4 137 aa21.21■□□□□ 0.99
CHMP2A-204ENST00000597848 PLD3Q8IV08 490 aa21.21■□□□□ 0.99
CHMP2A-204ENST00000597848 USP7Q93009 1102 aa21.21■□□□□ 0.99
CHMP2A-204ENST00000597848 ATP6V1E2Q96A05 226 aa21.21■□□□□ 0.99
CHMP2A-204ENST00000597848 TAAR9Q96RI9 348 aa21.21■□□□□ 0.99
CHMP2A-204ENST00000597848 ERVK-6Q9BXR3 956 aa21.21■□□□□ 0.99
CHMP2A-204ENST00000597848 APMAPQ9HDC9 416 aa21.21■□□□□ 0.99
CHMP2A-204ENST00000597848 IRAK4Q9NWZ3 460 aa21.21■□□□□ 0.99
CHMP2A-204ENST00000597848 COPG2Q9UBF2 871 aa21.21■□□□□ 0.99
CHMP2A-204ENST00000597848 SERTAD3Q9UJW9 196 aa21.21■□□□□ 0.99
CHMP2A-204ENST00000597848 PCDHGA8Q9Y5G5 932 aa21.21■□□□□ 0.99
CHMP2A-204ENST00000597848 MED19A0JLT2 244 aaPredicted RBP21.2■□□□□ 0.98
CHMP2A-204ENST00000597848 E2F3O00716 465 aa21.2■□□□□ 0.98
CHMP2A-204ENST00000597848 SUPT7LO94864 414 aa21.2■□□□□ 0.98
CHMP2A-204ENST00000597848 C1GALT1C1LP0DN25 315 aa21.2■□□□□ 0.98
CHMP2A-204ENST00000597848 EZRP15311 586 aaKnown RBP21.2■□□□□ 0.98
CHMP2A-204ENST00000597848 IMPDH1P20839 514 aa21.2■□□□□ 0.98
CHMP2A-204ENST00000597848 IRF8Q02556 426 aa21.2■□□□□ 0.98
CHMP2A-204ENST00000597848 CYP4F3Q08477 520 aa21.2■□□□□ 0.98
CHMP2A-204ENST00000597848 CHIT1Q13231 466 aa21.2■□□□□ 0.98
CHMP2A-204ENST00000597848 IL11RAQ14626 422 aa21.2■□□□□ 0.98
CHMP2A-204ENST00000597848 DCAF12Q5T6F0 453 aa21.2■□□□□ 0.98
CHMP2A-204ENST00000597848 TMEM164Q5U3C3 297 aa21.2■□□□□ 0.98
CHMP2A-204ENST00000597848 TBC1D19Q8N5T2 526 aa21.2■□□□□ 0.98
CHMP2A-204ENST00000597848 CCNYL1Q8N7R7 359 aa21.2■□□□□ 0.98
CHMP2A-204ENST00000597848 PKNOX2Q96KN3 472 aa21.2■□□□□ 0.98
CHMP2A-204ENST00000597848 ATP6V1G3Q96LB4 118 aa21.2■□□□□ 0.98
CHMP2A-204ENST00000597848 FCRL4Q96PJ5 515 aa21.2■□□□□ 0.98
CHMP2A-204ENST00000597848 SH3GL2Q99962 352 aa21.2■□□□□ 0.98
CHMP2A-204ENST00000597848 ZFYVE21Q9BQ24 234 aa21.2■□□□□ 0.98
CHMP2A-204ENST00000597848 AIF1LQ9BQI0 150 aa21.2■□□□□ 0.98
CHMP2A-204ENST00000597848 IPPKQ9H8X2 491 aa21.2■□□□□ 0.98
CHMP2A-204ENST00000597848 ACSS2Q9NR19 701 aa21.2■□□□□ 0.98
CHMP2A-204ENST00000597848 PILRAQ9UKJ1 303 aa21.2■□□□□ 0.98
CHMP2A-204ENST00000597848 PCTPQ9UKL6 214 aa21.2■□□□□ 0.98
CHMP2A-204ENST00000597848 KIF26BQ2KJY2 2108 aa21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 FEZF1A0PJY2 475 aa21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 TM9SF1O15321 606 aa21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 PRPF4O43172 522 aaKnown RBP eCLIP21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 HCRTR1O43613 425 aa21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 KATNA1O75449 491 aa21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 ZWINTO95229 277 aa21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 RPS17P08708 135 aaKnown RBP21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 EPORP19235 508 aa21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 ARL1P40616 181 aaPredicted RBP21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 GABRA4P48169 554 aa21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 RAB15P59190 212 aa21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 ZNF678Q5SXM1 525 aa21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 ATG9BQ674R7 924 aa21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 CEACAM20Q6UY09 585 aa21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 RPS27LQ71UM5 84 aaKnown RBP21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 RNF44Q7L0R7 432 aa21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 BPHLQ86WA6 291 aaPredicted RBP21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 PPP1R3BQ86XI6 285 aa21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 C10orf107Q8IVU9 208 aa21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 ANKRD42Q8N9B4 389 aa21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 OR4K1Q8NGD4 311 aa21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 OR1L3Q8NH93 324 aa21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 ZNF501Q96CX3 271 aaPredicted RBP21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 NXPE2Q96DL1 559 aa21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 PRR11Q96HE9 360 aaPredicted RBP21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 NSUN5Q96P11 429 aaKnown RBP21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 TMEM237Q96Q45 408 aa21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 SELENOSQ9BQE4 189 aa21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 NOL11Q9H8H0 719 aaKnown RBP21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 SEMA4BQ9NPR2 832 aaPredicted RBP21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 OXSMQ9NWU1 459 aa21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 ANGPTL2Q9UKU9 493 aa21.19■□□□□ 0.98
CHMP2A-204ENST00000597848 LOC105369274A0A096LPK9 316 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 LOC102723532A0A0G2JNH3 316 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 OR1F1O43749 312 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 SNRNP200O75643 2136 aaKnown RBP21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 OR2B3O76000 313 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 EIF2S1P05198 315 aaKnown RBP21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 MSL3P1P0C860 447 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 CXCR2P25025 360 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 CDH13P55290 713 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 VSX2P58304 361 aaPredicted RBP21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 RPS15AP62244 130 aaKnown RBP21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 RELAQ04206 551 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 DOC2AQ14183 400 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 RTP5Q14D33 572 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 PCLAFQ15004 111 aa21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 RBBP5Q15291 538 aaKnown RBP21.18■□□□□ 0.98
CHMP2A-204ENST00000597848 RBBP7Q16576 425 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms