RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 H2AFYO75367 372 aaKnown RBP14.42□□□□□ -0.1
TRIM28-207ENST00000597136 STK16O75716 305 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 SERPINE1P05121 402 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 RPS17P08708 135 aaKnown RBP14.42□□□□□ -0.1
TRIM28-207ENST00000597136 EBLN1P0CF75 366 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 SLC6A12P48065 614 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 MC2RQ01718 297 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 TAP2Q03519 686 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 EIF3IQ13347 325 aaKnown RBP14.42□□□□□ -0.1
TRIM28-207ENST00000597136 NAE1Q13564 534 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 SF1Q15637 639 aaKnown RBP14.42□□□□□ -0.1
TRIM28-207ENST00000597136 UNC50Q53HI1 259 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 KIAA1614Q5VZ46 1190 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 TTC19Q6DKK2 380 aaPredicted RBP14.42□□□□□ -0.1
TRIM28-207ENST00000597136 METTL2BQ6P1Q9 378 aaKnown RBP14.42□□□□□ -0.1
TRIM28-207ENST00000597136 UNQ6494/PRO21346Q6UXR6 183 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 RPS27LQ71UM5 84 aaKnown RBP14.42□□□□□ -0.1
TRIM28-207ENST00000597136 TRIM42Q8IWZ5 723 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 SYTL1Q8IYJ3 562 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 RAB42Q8N4Z0 105 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 OR2A1Q8NGT9 310 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 OR56A3Q8NH54 315 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 PPP1R14CQ8TAE6 165 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 HMGCLL1Q8TB92 370 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 RAB3IL1Q8TBN0 382 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 PYCR2Q96C36 320 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 NXPE2Q96DL1 559 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 MAGEB18Q96M61 343 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 MIPEPQ99797 713 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 RAB11FIP5Q9BXF6 653 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 FAM60AQ9NP50 221 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 SLC39A1Q9NY26 324 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 AKAP7Q9P0M2 348 aaPredicted RBP14.42□□□□□ -0.1
TRIM28-207ENST00000597136 PCTPQ9UKL6 214 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 CFAP47Q6ZTR5 3102 aa14.42□□□□□ -0.1
TRIM28-207ENST00000597136 ZNF839A8K0R7 811 aa14.41□□□□□ -0.1
TRIM28-207ENST00000597136 C9orf172C9J069 976 aa14.41□□□□□ -0.1
TRIM28-207ENST00000597136 E2F3O00716 465 aa14.41□□□□□ -0.1
TRIM28-207ENST00000597136 NRP2O60462 931 aa14.41□□□□□ -0.1
TRIM28-207ENST00000597136 SUPT7LO94864 414 aa14.41□□□□□ -0.1
TRIM28-207ENST00000597136 ZBTB11O95625 1053 aaPredicted RBP14.41□□□□□ -0.1
TRIM28-207ENST00000597136 GRK2P25098 689 aa14.41□□□□□ -0.1
TRIM28-207ENST00000597136 FOXM1Q08050 763 aa14.41□□□□□ -0.1
TRIM28-207ENST00000597136 GPR19Q15760 415 aa14.41□□□□□ -0.1
TRIM28-207ENST00000597136 SLC5A12Q1EHB4 618 aa14.41□□□□□ -0.1
TRIM28-207ENST00000597136 CFAP157Q5JU67 520 aa14.41□□□□□ -0.1
TRIM28-207ENST00000597136 KLHDC8AQ8IYD2 350 aa14.41□□□□□ -0.1
TRIM28-207ENST00000597136 D2HGDHQ8N465 521 aa14.41□□□□□ -0.1
TRIM28-207ENST00000597136 LRRC8CQ8TDW0 803 aa14.41□□□□□ -0.1
TRIM28-207ENST00000597136 MED8Q96G25 268 aa14.41□□□□□ -0.1
TRIM28-207ENST00000597136 NSUN5Q96P11 429 aaKnown RBP14.41□□□□□ -0.1
TRIM28-207ENST00000597136 OR6C1Q96RD1 312 aa14.41□□□□□ -0.1
TRIM28-207ENST00000597136 INTS7Q9NVH2 962 aaKnown RBP14.41□□□□□ -0.1
TRIM28-207ENST00000597136 FOXJ2Q9P0K8 574 aa14.41□□□□□ -0.1
TRIM28-207ENST00000597136 B3GALT1Q9Y5Z6 326 aa14.41□□□□□ -0.1
TRIM28-207ENST00000597136 A0A0J9YY10 115 aa14.4□□□□□ -0.1
TRIM28-207ENST00000597136 CDRT15L2A8MXV6 281 aa14.4□□□□□ -0.1
TRIM28-207ENST00000597136 K7EPI3 171 aa14.4□□□□□ -0.1
TRIM28-207ENST00000597136 TAF4O00268 1085 aa14.4□□□□□ -0.1
TRIM28-207ENST00000597136 KLF11O14901 512 aa14.4□□□□□ -0.1
TRIM28-207ENST00000597136 TLX3O43711 291 aaPredicted RBP14.4□□□□□ -0.1
TRIM28-207ENST00000597136 CCNT2O60583 730 aaKnown RBP14.4□□□□□ -0.1
TRIM28-207ENST00000597136 DXOO77932 396 aaKnown RBP14.4□□□□□ -0.1
TRIM28-207ENST00000597136 WDR47O94967 919 aa14.4□□□□□ -0.1
TRIM28-207ENST00000597136 CTSBP07858 339 aa14.4□□□□□ -0.1
TRIM28-207ENST00000597136 MAGP20916 626 aa14.4□□□□□ -0.1
TRIM28-207ENST00000597136 RBMS1P29558 406 aaKnown RBP14.4□□□□□ -0.1
TRIM28-207ENST00000597136 SLC5A2P31639 672 aa14.4□□□□□ -0.1
TRIM28-207ENST00000597136 HSD11B2P80365 405 aa14.4□□□□□ -0.1
TRIM28-207ENST00000597136 BST1Q10588 318 aa14.4□□□□□ -0.1
TRIM28-207ENST00000597136 STX3Q13277 289 aa14.4□□□□□ -0.1
TRIM28-207ENST00000597136 COL9A2Q14055 689 aaPredicted RBP14.4□□□□□ -0.1
TRIM28-207ENST00000597136 ATG16L1Q676U5 607 aa14.4□□□□□ -0.1
TRIM28-207ENST00000597136 FRMD7Q6ZUT3 714 aa14.4□□□□□ -0.1
TRIM28-207ENST00000597136 ZNF483Q8TF39 744 aaPredicted RBP14.4□□□□□ -0.1
TRIM28-207ENST00000597136 SMPDL3AQ92484 453 aa14.4□□□□□ -0.1
TRIM28-207ENST00000597136 CNDP1Q96KN2 507 aa14.4□□□□□ -0.1
TRIM28-207ENST00000597136 SGPP1Q9BX95 441 aa14.4□□□□□ -0.1
TRIM28-207ENST00000597136 GSTO2Q9H4Y5 243 aa14.4□□□□□ -0.1
TRIM28-207ENST00000597136 CCDC134Q9H6E4 229 aa14.4□□□□□ -0.1
TRIM28-207ENST00000597136 CCDC86Q9H6F5 360 aaKnown RBP14.4□□□□□ -0.1
TRIM28-207ENST00000597136 FBXO8Q9NRD0 319 aa14.4□□□□□ -0.1
TRIM28-207ENST00000597136 SOHLH2Q9NX45 425 aa14.4□□□□□ -0.1
TRIM28-207ENST00000597136 OPTCQ9UBM4 332 aa14.4□□□□□ -0.1
TRIM28-207ENST00000597136 PKD1L2Q7Z442 2459 aa14.4□□□□□ -0.1
TRIM28-207ENST00000597136 MGAQ8IWI9 3026 aa14.4□□□□□ -0.1
TRIM28-207ENST00000597136 B4E171 279 aa14.39□□□□□ -0.11
TRIM28-207ENST00000597136 NPHS1O60500 1241 aa14.39□□□□□ -0.11
TRIM28-207ENST00000597136 ARRB2P32121 409 aa14.39□□□□□ -0.11
TRIM28-207ENST00000597136 TSPAN7P41732 249 aa14.39□□□□□ -0.11
TRIM28-207ENST00000597136 GRIA3P42263 894 aa14.39□□□□□ -0.11
TRIM28-207ENST00000597136 CCR10P46092 362 aa14.39□□□□□ -0.11
TRIM28-207ENST00000597136 ARL4DP49703 201 aa14.39□□□□□ -0.11
TRIM28-207ENST00000597136 CDH13P55290 713 aa14.39□□□□□ -0.11
TRIM28-207ENST00000597136 NAA20P61599 178 aa14.39□□□□□ -0.11
TRIM28-207ENST00000597136 TBPL1P62380 186 aa14.39□□□□□ -0.11
TRIM28-207ENST00000597136 RCN2Q14257 317 aa14.39□□□□□ -0.11
TRIM28-207ENST00000597136 FCRL6Q6DN72 434 aa14.39□□□□□ -0.11
TRIM28-207ENST00000597136 CAPN13Q6MZZ7 669 aaPredicted RBP14.39□□□□□ -0.11
TRIM28-207ENST00000597136 FIGLAQ6QHK4 219 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms