RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 C16orf46Q6P387 395 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 FBXO42Q6P3S6 717 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 LCTLQ6UWM7 567 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 TTLL10Q6ZVT0 673 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 THOC6Q86W42 341 aaKnown RBP10.62□□□□□ -0.71
LIG1-211ENST00000596457 PAQR7Q86WK9 346 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 OR4N4Q8N0Y3 316 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 CT55Q8WUE5 264 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 ANKRD7Q92527 254 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 ESAMQ96AP7 390 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 PTERQ96BW5 349 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 SCYL1Q96KG9 808 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 UBXN10Q96LJ8 280 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 TSNARE1Q96NA8 513 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 ZFYVE21Q9BQ24 234 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 CCDC77Q9BR77 488 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 NDC1Q9BTX1 674 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 PCBD2Q9H0N5 130 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 TMEM184CQ9NVA4 438 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 WWOXQ9NZC7 414 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 DHCR7Q9UBM7 475 aaKnown RBP10.62□□□□□ -0.71
LIG1-211ENST00000596457 TBK1Q9UHD2 729 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 DYRK1BQ9Y463 629 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 PCDHB3Q9Y5E6 796 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 ZNF462Q96JM2 2506 aa10.62□□□□□ -0.71
LIG1-211ENST00000596457 TEP1Q99973 2627 aaKnown RBP10.61□□□□□ -0.71
LIG1-211ENST00000596457 OR2A25A4D2G3 310 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 SMIM23A6NLE4 172 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 H0YGG7 62 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 ERVH48-1M5A8F1 160 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 MEN1O00255 615 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 ZSCAN9O15535 394 aaPredicted RBP10.61□□□□□ -0.71
LIG1-211ENST00000596457 ALDOAP04075 364 aaKnown RBP10.61□□□□□ -0.71
LIG1-211ENST00000596457 ABHD2P08910 425 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 SNRPAP09012 282 aaKnown RBP10.61□□□□□ -0.71
LIG1-211ENST00000596457 HBQ1P09105 142 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 MSL3P1P0C860 447 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 NPPBP16860 134 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 WT1P19544 449 aaPredicted RBP10.61□□□□□ -0.71
LIG1-211ENST00000596457 AGXTP21549 392 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 F8A1P23610 371 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 TNFRSF8P28908 595 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 GDF5P43026 501 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 KCNC1P48547 511 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 ARF3P61204 181 aaPredicted RBP10.61□□□□□ -0.71
LIG1-211ENST00000596457 CYP4F2P78329 520 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 CDKL1Q00532 357 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 TGFBIQ15582 683 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 FAM83EQ2M2I3 478 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 ZXDCQ2QGD7 858 aaPredicted RBP10.61□□□□□ -0.71
LIG1-211ENST00000596457 TCTE1Q5JU00 501 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 LGSNQ5TDP6 509 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 MLIPQ5VWP3 458 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 KLC3Q6P597 504 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 TLDC1Q6P9B6 456 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 DSELQ8IZU8 1212 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 METTL27Q8N6F8 245 aaPredicted RBP10.61□□□□□ -0.71
LIG1-211ENST00000596457 EIF1ADQ8N9N8 165 aaKnown RBP10.61□□□□□ -0.71
LIG1-211ENST00000596457 SNX31Q8N9S9 440 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 OR56A3Q8NH54 315 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 STAG3L4Q8TBR4 150 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 RERGQ96A58 199 aaPredicted RBP10.61□□□□□ -0.71
LIG1-211ENST00000596457 KIAA1191Q96A73 305 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 RHBDF1Q96CC6 855 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 RUFY1Q96T51 708 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 HAUS8Q9BT25 410 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 SGPP1Q9BX95 441 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 TXLNGYQ9BZA5 131 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 CHRNA10Q9GZZ6 450 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 CHST8Q9H2A9 424 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 PRM3Q9NNZ6 103 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 PCMTD2Q9NV79 361 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 ANKMY1Q9P2S6 941 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 IL17BQ9UHF5 180 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 GPN3Q9UHW5 284 aaPredicted RBP10.61□□□□□ -0.71
LIG1-211ENST00000596457 SLC22A14Q9Y267 594 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 AP1M2Q9Y6Q5 423 aa10.61□□□□□ -0.71
LIG1-211ENST00000596457 MDC1Q14676 2089 aaKnown RBP10.61□□□□□ -0.71
LIG1-211ENST00000596457 K7ENP7 123 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 UBXN8O00124 270 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 CCNT2O60583 730 aaKnown RBP10.6□□□□□ -0.71
LIG1-211ENST00000596457 SRPX2O60687 465 aaPredicted RBP10.6□□□□□ -0.71
LIG1-211ENST00000596457 KLHL2O95198 593 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 SHBGP04278 402 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 SERPIND1P05546 499 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 PRKAR1AP10644 381 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 CNTFP26441 200 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 GCAP28676 217 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 GRK3P35626 688 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 HSPA7P48741 367 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 HNMTP50135 292 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 ARSFP54793 590 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 RPS18P62269 152 aaKnown RBP10.6□□□□□ -0.71
LIG1-211ENST00000596457 RPS15P62841 145 aaKnown RBP10.6□□□□□ -0.71
LIG1-211ENST00000596457 DNASE1L3Q13609 305 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 GRM7Q14831 915 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 CATSPEREQ5SY80 951 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 SULT1C3Q6IMI6 304 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 ZNF425Q6IV72 752 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 INO80CQ6PI98 192 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms