RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 HBQ1P09105 142 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 CDH1P12830 882 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 PTPN4P29074 926 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 PHBP35232 272 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 GDF5P43026 501 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 MEF2AQ02078 507 aaPredicted RBP10.65□□□□□ -0.7
VRK3-210ENST00000596121 RHDQ02161 417 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 RELAQ04206 551 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 CDC20Q12834 499 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 ERV3-1Q14264 604 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 CSHL1Q14406 222 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 UAP1Q16222 522 aaPredicted RBP10.65□□□□□ -0.7
VRK3-210ENST00000596121 FBXO48Q5FWF7 155 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 CATSPEREQ5SY80 951 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 TEX35Q5T0J7 233 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 CAPN13Q6MZZ7 669 aaPredicted RBP10.65□□□□□ -0.7
VRK3-210ENST00000596121 LCTLQ6UWM7 567 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 TTLL10Q6ZVT0 673 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 COX15Q7KZN9 410 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 VN1R4Q7Z5H5 301 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 ADCK2Q7Z695 626 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 ISCA2Q86U28 154 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 CENPLQ8N0S6 344 aaPredicted RBP10.65□□□□□ -0.7
VRK3-210ENST00000596121 METTL27Q8N6F8 245 aaPredicted RBP10.65□□□□□ -0.7
VRK3-210ENST00000596121 ZNF740Q8NDX6 193 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 DCAKDQ8WVC6 231 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 KCTD4Q8WVF5 259 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 ESAMQ96AP7 390 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 RHBDF1Q96CC6 855 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 NXNL1Q96CM4 212 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 C10orf90Q96M02 699 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 GPR78Q96P69 363 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 TMEM79Q9BSE2 394 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 NDC1Q9BTX1 674 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 NLNQ9BYT8 704 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 SEMA4CQ9C0C4 833 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 CUTCQ9NTM9 273 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 TMEM184CQ9NVA4 438 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 IRAK4Q9NWZ3 460 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 ANKMY1Q9P2S6 941 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 KCND3Q9UK17 655 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 MRPS2Q9Y399 296 aaKnown RBP10.65□□□□□ -0.7
VRK3-210ENST00000596121 ASB1Q9Y576 335 aa10.65□□□□□ -0.7
VRK3-210ENST00000596121 MDC1Q14676 2089 aaKnown RBP10.65□□□□□ -0.7
VRK3-210ENST00000596121 KALRNO60229 2985 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 CCDC88CQ9P219 2028 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 FEZF1A0PJY2 475 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 HYKKA2RU49 373 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 CDC14CA4D256 554 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 NCF1BA6NI72 391 aaPredicted RBP10.64□□□□□ -0.71
VRK3-210ENST00000596121 NCF1CA8MVU1 366 aaPredicted RBP10.64□□□□□ -0.71
VRK3-210ENST00000596121 ATXN7O15265 892 aaPredicted RBP10.64□□□□□ -0.71
VRK3-210ENST00000596121 RIPK2O43353 540 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 PRAMEF4O60810 478 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 CCNDBP1O95273 360 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 ONECUT2O95948 504 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 PRB1P04280 392 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 RAB40ALP0C0E4 278 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 NCF1P14598 390 aaPredicted RBP10.64□□□□□ -0.71
VRK3-210ENST00000596121 ALAS2P22557 587 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 CRABP2P29373 138 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 BCL6P41182 706 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 OR1D4P47884 311 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 SLC6A12P48065 614 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 DCDP81605 110 aaKnown RBP10.64□□□□□ -0.71
VRK3-210ENST00000596121 CDKL1Q00532 357 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 ILF2Q12905 390 aaKnown RBP10.64□□□□□ -0.71
VRK3-210ENST00000596121 LY6DQ14210 128 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 GRM7Q14831 915 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 NCF4Q15080 339 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 TGFBIQ15582 683 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 DEFB109BQ30KR1 87 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 NKAIN1Q4KMZ8 207 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 TCTE1Q5JU00 501 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 PRAMEF9Q5VWM5 478 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 MLIPQ5VWP3 458 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 MRPL14Q6P1L8 145 aaKnown RBP10.64□□□□□ -0.71
VRK3-210ENST00000596121 CEP128Q6ZU80 1094 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 ADAMTSL2Q86TH1 951 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 THOC6Q86W42 341 aaKnown RBP10.64□□□□□ -0.71
VRK3-210ENST00000596121 KLHDC8AQ8IYD2 350 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 PLD6Q8N2A8 252 aaKnown RBP10.64□□□□□ -0.71
VRK3-210ENST00000596121 ZSCAN1Q8NBB4 408 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 ABHD11Q8NFV4 315 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 OR4K1Q8NGD4 311 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 PROKR1Q8TCW9 393 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 ADAMTS17Q8TE56 1095 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 NEIL2Q969S2 332 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 KIAA1191Q96A73 305 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 TSNARE1Q96NA8 513 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 UBL7Q96S82 380 aaPredicted RBP10.64□□□□□ -0.71
VRK3-210ENST00000596121 PAFAH2Q99487 392 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 DHRS4Q9BTZ2 278 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 EFHD1Q9BUP0 239 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 GPR87Q9BY21 358 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 TRIM54Q9BYV2 358 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 SLC7A5P2Q9GIP4 190 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 PCBD2Q9H0N5 130 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 TSPYL1Q9H0U9 437 aa10.64□□□□□ -0.71
VRK3-210ENST00000596121 ANKZF1Q9H8Y5 726 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms