RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 DNAJC22Q8N4W6 341 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 DNAAF3Q8N9W5 541 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 TTC29Q8NA56 475 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-226ENST00000591534 DNAJB14Q8TBM8 379 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 ASZ1Q8WWH4 475 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 ATG4AQ8WYN0 398 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 SNF8Q96H20 258 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 MS4A14Q96JA4 679 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 RHOVQ96L33 236 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 BARD1Q99728 777 aaKnown RBP9.05□□□□□ -0.96
BRCA1-226ENST00000591534 RAB11FIP5Q9BXF6 653 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 FAM60AQ9NP50 221 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 SEMA3GQ9NS98 782 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 EURLQ9NYK6 297 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 ASIC3Q9UHC3 531 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 RAB21Q9UL25 225 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 CDYLQ9Y232 598 aa9.05□□□□□ -0.96
BRCA1-226ENST00000591534 A0A1B0GUH1 482 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 HEATR9A2RTY3 570 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 H3BMH7 237 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 CCL22O00626 93 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 DSCR3O14972 297 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 FANCGO15287 622 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 OIP5O43482 229 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 SRPX2O60687 465 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-226ENST00000591534 METTL18O95568 372 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 CLDN1O95832 211 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 APOA4P06727 396 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 MYBL2P10244 700 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 ACADLP28330 430 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 FDFT1P37268 417 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 TSFMP43897 325 aaKnown RBP9.04□□□□□ -0.96
BRCA1-226ENST00000591534 CARSP49589 748 aaKnown RBP9.04□□□□□ -0.96
BRCA1-226ENST00000591534 CDKN1CP49918 316 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-226ENST00000591534 CDC16Q13042 620 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 PTK6Q13882 451 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 SLC9A5Q14940 896 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 MORF4L2Q15014 288 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 TMED2Q15363 201 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 SF1Q15637 639 aaKnown RBP9.04□□□□□ -0.96
BRCA1-226ENST00000591534 ZIC1Q15915 447 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 RBBP7Q16576 425 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 TUBB8Q3ZCM7 444 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 AARS2Q5JTZ9 985 aaKnown RBP9.04□□□□□ -0.96
BRCA1-226ENST00000591534 FAM180AQ6UWF9 173 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 UNC5DQ6UXZ4 953 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 CUZD1Q86UP6 607 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 TICAM1Q8IUC6 712 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 KLHDC8BQ8IXV7 354 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 PRELID2Q8N945 189 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 GOLM1Q8NBJ4 401 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 GABPB2Q8TAK5 448 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-226ENST00000591534 SLC35B2Q8TB61 432 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 ZUFSPQ96AP4 578 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 LHPPQ9H008 270 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 SLC26A1Q9H2B4 701 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 PIH1D1Q9NWS0 290 aaKnown RBP9.04□□□□□ -0.96
BRCA1-226ENST00000591534 SPHK1Q9NYA1 384 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 ANAPC5Q9UJX4 755 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 FBXL4Q9UKA2 621 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 SLC39A10Q9ULF5 831 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 FAM169AQ9Y6X4 670 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 ESPL1Q14674 2120 aa9.04□□□□□ -0.96
BRCA1-226ENST00000591534 ICE1Q9Y2F5 2266 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 SLC5A10A0PJK1 596 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 DYTNA2CJ06 578 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 MROH6A6NGR9 719 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 TARM1B6A8C7 271 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 E7EVH7 732 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 KPNA5O15131 536 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 EIF3HO15372 352 aaKnown RBP eCLIP9.03□□□□□ -0.96
BRCA1-226ENST00000591534 HNRNPRO43390 633 aaKnown RBP9.03□□□□□ -0.96
BRCA1-226ENST00000591534 ONECUT2O95948 504 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 UMODP07911 640 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 RHOXF2BP0C7M4 288 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 RNF224P0DH78 156 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 ETS1P14921 441 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 TPH1P17752 444 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 MAGP20916 626 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 CD9P21926 228 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 NME2P22392 152 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 FDXRP22570 491 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 COL8A1P27658 744 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 PKLRP30613 574 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 GABRA4P48169 554 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 AP2B1P63010 937 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 GUCY2DQ02846 1103 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 OCA2Q04671 838 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 C2orf54Q08AI8 447 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 HSPA14Q0VDF9 509 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 CDH17Q12864 832 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 ZNF169Q14929 603 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-226ENST00000591534 ERCC6LQ2NKX8 1250 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 FASTKD1Q53R41 847 aaKnown RBP9.03□□□□□ -0.96
BRCA1-226ENST00000591534 CRB2Q5IJ48 1285 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 KCTD11Q693B1 232 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 PRMT9Q6P2P2 845 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 AFTPHQ6ULP2 937 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 IGFL2Q6UWQ7 119 aa9.03□□□□□ -0.96
BRCA1-226ENST00000591534 ISLR2Q6UXK2 745 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms