RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 ZNF304Q9HCX3 659 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 TP53TG5Q9Y2B4 290 aa11.54□□□□□ -0.56
TPM4-212ENST00000590180 MTO1Q9Y2Z2 717 aaKnown RBP11.54□□□□□ -0.56
TPM4-212ENST00000590180 HELZ2Q9BYK8 2649 aaKnown RBP11.54□□□□□ -0.56
TPM4-212ENST00000590180 ESYT3A0FGR9 886 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 J3QKU1 62 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 K7EM74 188 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 TXNDC9O14530 226 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 HAT1O14929 419 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 SUV39H1O43463 412 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 CNOT3O75175 753 aaKnown RBP11.53□□□□□ -0.56
TPM4-212ENST00000590180 ALBP02768 609 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 GSTA2P09210 222 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 NR1D1P20393 614 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 CCND1P24385 295 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 RRADP55042 308 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 AP1S2P56377 157 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 OCA2Q04671 838 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 ATP1A4Q13733 1029 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 ZNF460Q14592 562 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 NKG7Q16617 165 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 PRTGQ2VWP7 1150 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 TCTN3Q6NUS6 607 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 PRMT9Q6P2P2 845 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 ZDHHC24Q6UX98 284 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 SHISA6Q6ZSJ9 500 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 ASB18Q6ZVZ8 466 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 MED25Q71SY5 747 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 C17orf64Q86WR6 236 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 DTWD1Q8N5C7 304 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 TMEM102Q8N9M5 508 aaPredicted RBP11.53□□□□□ -0.56
TPM4-212ENST00000590180 TEX19Q8NA77 164 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 ATL1Q8WXF7 558 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 PYCR2Q96C36 320 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 PDLIM5Q96HC4 596 aaKnown RBP11.53□□□□□ -0.56
TPM4-212ENST00000590180 IP6K3Q96PC2 410 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 OR2A5Q96R48 311 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 SLC25A23Q9BV35 468 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 GPAMQ9HCL2 828 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 G3BP2Q9UN86 482 aaKnown RBP11.53□□□□□ -0.56
TPM4-212ENST00000590180 CDC14AQ9UNH5 594 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 HEATR5BQ9P2D3 2071 aa11.53□□□□□ -0.56
TPM4-212ENST00000590180 TCRBV9S1A1TA0A576 114 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 PYCARD-AS1I3L0S3 204 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 CDC7O00311 574 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 MED26O95402 600 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 ONECUT2O95948 504 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 STATHP02808 62 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 ENO2P09104 434 aaPredicted RBP11.52□□□□□ -0.57
TPM4-212ENST00000590180 EZRP15311 586 aaKnown RBP11.52□□□□□ -0.57
TPM4-212ENST00000590180 NPPBP16860 134 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 ITGAXP20702 1163 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 GRK3P35626 688 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 GPX6P59796 221 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 POU4F1Q01851 419 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 GUCY2DQ02846 1103 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 RELAQ04206 551 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 ILF2Q12905 390 aaKnown RBP11.52□□□□□ -0.57
TPM4-212ENST00000590180 USP10Q14694 798 aaKnown RBP11.52□□□□□ -0.57
TPM4-212ENST00000590180 HKDC1Q2TB90 917 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 LCTLQ6UWM7 567 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 CYS1Q717R9 158 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 CEP97Q8IW35 865 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 TMEM151BQ8IW70 566 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 PRSS58Q8IYP2 241 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 PPM1NQ8N819 430 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 MNS1Q8NEH6 495 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 FKBP10Q96AY3 582 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 FBXL8Q96CD0 374 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 TSPAN17Q96FV3 270 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 FER1L6-AS2Q96M78 137 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 CPNE1Q99829 537 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 HAUS8Q9BT25 410 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 SOX17Q9H6I2 414 aaPredicted RBP11.52□□□□□ -0.57
TPM4-212ENST00000590180 LRRC4CQ9HCJ2 640 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 ENAMQ9NRM1 1142 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 P4HTMQ9NXG6 502 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 CTNNAL1Q9UBT7 734 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 IKZF3Q9UKT9 509 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 RUVBL1Q9Y265 456 aaKnown RBP11.52□□□□□ -0.57
TPM4-212ENST00000590180 NBASA2RRP1 2371 aa11.52□□□□□ -0.57
TPM4-212ENST00000590180 FER1L5A0AVI2 2057 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 FEZF1A0PJY2 475 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 NPEPPSL1A6NEC2 478 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 FAM159BA6NKW6 160 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 IGHEP01854 428 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 TUBB4AP04350 444 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 UMODP07911 640 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 ANXA5P08758 320 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 CDH1P12830 882 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 ZNF37AP17032 561 aaPredicted RBP11.51□□□□□ -0.57
TPM4-212ENST00000590180 FBLP22087 321 aaKnown RBP11.51□□□□□ -0.57
TPM4-212ENST00000590180 SPRP35270 261 aaPredicted RBP11.51□□□□□ -0.57
TPM4-212ENST00000590180 GP5P40197 560 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 PGDP52209 483 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 EMP3P54852 163 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 RPS15AP62244 130 aaKnown RBP11.51□□□□□ -0.57
TPM4-212ENST00000590180 CSNK1G2P78368 415 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 KLRB1Q12918 225 aa11.51□□□□□ -0.57
TPM4-212ENST00000590180 RAPSNQ13702 412 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms