RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 RPP25Q9BUL9 199 aaKnown RBP10.04□□□□□ -0.8
VPS25-203ENST00000589520 BDH2Q9BUT1 245 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 C9orf16Q9BUW7 83 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 THUMPD3Q9BV44 507 aaKnown RBP10.04□□□□□ -0.8
VPS25-203ENST00000589520 SPATA9Q9BWV2 254 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 OSBPL11Q9BXB4 747 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 CLDND1Q9NY35 253 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 SLAMF8Q9P0V8 285 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.04□□□□□ -0.8
VPS25-203ENST00000589520 BTNL2Q9UIR0 455 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 CORO2BQ9UQ03 480 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 SLC17A4Q9Y2C5 497 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 TMEM98Q9Y2Y6 226 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 C2orf16Q68DN1 1984 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 DENND4AQ7Z401 1863 aa10.04□□□□□ -0.8
VPS25-203ENST00000589520 TRBV5-3A0A0A0MS03 114 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 TCRBV5S2A0A599 114 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 ELOVL7A1L3X0 281 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 C9JVG2 144 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 RFXANKO14593 260 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 AKAP10O43572 662 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 RNGTTO60942 597 aaKnown RBP10.03□□□□□ -0.8
VPS25-203ENST00000589520 SEMA3DO95025 777 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 PAK4O96013 591 aaPredicted RBP10.03□□□□□ -0.8
VPS25-203ENST00000589520 SLC35G4P0C7Q5 338 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 ZCCHC18P0CG32 403 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 CDH1P12830 882 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 HOXB2P14652 356 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 ZNF26P17031 533 aaPredicted RBP10.03□□□□□ -0.8
VPS25-203ENST00000589520 CD22P20273 847 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 ATP6V1B2P21281 511 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 IDSP22304 550 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 GSTM2P28161 218 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 HPCAL1P37235 193 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 WASP42768 502 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 CLCNKAP51800 687 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 AQP4P55087 323 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 POLE2P56282 527 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 SLBPQ14493 270 aaKnown RBP eCLIP10.03□□□□□ -0.8
VPS25-203ENST00000589520 DUOXA1Q1HG43 343 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 LRIT3Q3SXY7 679 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 CCSMST1Q4G0I0 132 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 FAM98BQ52LJ0 330 aaKnown RBP10.03□□□□□ -0.8
VPS25-203ENST00000589520 C2orf27AQ580R0 203 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 TMEM196Q5HYL7 178 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 FAM219BQ5XKK7 198 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 NAIF1Q69YI7 327 aaPredicted RBP10.03□□□□□ -0.8
VPS25-203ENST00000589520 PPP4R4Q6NUP7 873 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 ERICH5Q6P6B1 374 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 XKR5Q6UX68 686 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 TMPRSS11BQ86T26 416 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 IFNEQ86WN2 208 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 ADGRG5Q8IZF4 528 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 OR14C36Q8NHC7 312 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 HUS1BQ8NHY5 278 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 LRTOMTQ8WZ04 291 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 FOXJ1Q92949 421 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 NEIL2Q969S2 332 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 MTERF3Q96E29 417 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 SIPA1Q96FS4 1042 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 PPM1MQ96MI6 270 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 ZNF583Q96ND8 569 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 QRFPRQ96P65 431 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 PHF12Q96QT6 1004 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 AIF1LQ9BQI0 150 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 ZNF576Q9H609 170 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 MVB12BQ9H7P6 319 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 ATAD3AQ9NVI7 634 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 VAPAQ9P0L0 249 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 EGFL7Q9UHF1 273 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 INVSQ9Y283 1065 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 DLGAP4Q9Y2H0 992 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 HEBP2Q9Y5Z4 205 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 NCOR1O75376 2440 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 MUC6Q6W4X9 2439 aa10.03□□□□□ -0.8
VPS25-203ENST00000589520 TBC1D3DA0A087WVF3 549 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 TBC1D3IA0A087WXS9 549 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 TBC1D3EA0A087X179 549 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 TBC1D3KA0A087X1G2 549 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 A0A1W2PQU0 124 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 TBC1D3FA6NER0 549 aaPredicted RBP10.02□□□□□ -0.81
VPS25-203ENST00000589520 MAGEB17A8MXT2 336 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 TBC1D3LB9A6J9 549 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 RETP07949 1114 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 ANXA4P09525 319 aaPredicted RBP10.02□□□□□ -0.81
VPS25-203ENST00000589520 TBC1D3HP0C7X1 549 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 RAP2AP10114 183 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 ACADMP11310 421 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 PCNAP12004 261 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 COX7A2P14406 83 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 HRH2P25021 359 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 NDUFS1P28331 727 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 TIA1P31483 386 aaKnown RBP eCLIP10.02□□□□□ -0.817e-7■□□□□ 8.5
VPS25-203ENST00000589520 ATXN3P54252 364 aaPredicted RBP10.02□□□□□ -0.81
VPS25-203ENST00000589520 KIAA1024LP59773 190 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 CHRNB3Q05901 458 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 IRF4Q15306 451 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 LRRC36Q1X8D7 754 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 PGS1Q32NB8 556 aa10.02□□□□□ -0.81
VPS25-203ENST00000589520 TMTC4Q5T4D3 741 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms