RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 DPH7Q9BTV6 452 aa21.77■■□□□ 1.08
ACTN4-210ENST00000588618 PELI2Q9HAT8 420 aa21.77■■□□□ 1.08
ACTN4-210ENST00000588618 TRAF6Q9Y4K3 522 aa21.77■■□□□ 1.08
ACTN4-210ENST00000588618 ZFHX2Q9C0A1 2572 aaPredicted RBP21.76■■□□□ 1.07
ACTN4-210ENST00000588618 CAPN1P07384 714 aa21.76■■□□□ 1.07
ACTN4-210ENST00000588618 VARSP26640 1264 aaKnown RBP21.76■■□□□ 1.07
ACTN4-210ENST00000588618 SERPINB3P29508 390 aa21.76■■□□□ 1.07
ACTN4-210ENST00000588618 E2F2Q14209 437 aa21.76■■□□□ 1.07
ACTN4-210ENST00000588618 GGTA1PQ4G0N0 100 aa21.76■■□□□ 1.07
ACTN4-210ENST00000588618 STPG1Q5TH74 334 aa21.76■■□□□ 1.07
ACTN4-210ENST00000588618 KIAA1614Q5VZ46 1190 aa21.76■■□□□ 1.07
ACTN4-210ENST00000588618 CPLX4Q7Z7G2 160 aa21.76■■□□□ 1.07
ACTN4-210ENST00000588618 TBC1D19Q8N5T2 526 aa21.76■■□□□ 1.07
ACTN4-210ENST00000588618 L3MBTL4Q8NA19 623 aa21.76■■□□□ 1.07
ACTN4-210ENST00000588618 FAR2Q96K12 515 aa21.76■■□□□ 1.07
ACTN4-210ENST00000588618 CDC6Q99741 560 aa21.76■■□□□ 1.07
ACTN4-210ENST00000588618 RAB33BQ9H082 229 aa21.76■■□□□ 1.07
ACTN4-210ENST00000588618 SPNS1Q9H2V7 528 aa21.76■■□□□ 1.07
ACTN4-210ENST00000588618 SNX7Q9UNH6 387 aa21.76■■□□□ 1.07
ACTN4-210ENST00000588618 TIMM22Q9Y584 194 aa21.76■■□□□ 1.07
ACTN4-210ENST00000588618 MDC1Q14676 2089 aaKnown RBP21.76■■□□□ 1.07
ACTN4-210ENST00000588618 RIF1Q5UIP0 2472 aaKnown RBP21.75■■□□□ 1.07
ACTN4-210ENST00000588618 KCNE1BA0A087WTH5 132 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 A0A0J9YY10 115 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 ZNF195O14628 629 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 RPLP0P05388 317 aaKnown RBP21.75■■□□□ 1.07
ACTN4-210ENST00000588618 FGF4P08620 206 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 UROSP10746 265 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 JUPP14923 745 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 PCDH1Q08174 1060 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 SLBPQ14493 270 aaKnown RBP eCLIP21.75■■□□□ 1.07
ACTN4-210ENST00000588618 UGT3A2Q3SY77 523 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 GRHL2Q6ISB3 625 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 USP53Q70EK8 1073 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 ASCL5Q7RTU5 278 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 TRIM73Q86UV7 250 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 ABHD11Q8NFV4 315 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 PPM1MQ96MI6 270 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 PHOX2BQ99453 314 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 CD180Q99467 661 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 ABCG4Q9H172 646 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 ELOVL6Q9H5J4 265 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 TMEM184CQ9NVA4 438 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 EPHA6Q9UF33 1036 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 SNX6Q9UNH7 406 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 SLCO1B7G3V0H7 640 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 NRP2O60462 931 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 RASSF9O75901 435 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 TROVE2P10155 538 aaKnown RBP eCLIP21.75■■□□□ 1.071e-6■■□□□ 12.5
ACTN4-210ENST00000588618 CD1CP29017 333 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 CASP2P42575 452 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 HK2P52789 917 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 KANK2Q63ZY3 851 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 FAM92BQ6ZTR7 304 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 RFWD2Q8NHY2 731 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 CCT6BQ92526 530 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 UBE2E3Q969T4 207 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 REPS1Q96D71 796 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 SLC29A3Q9BZD2 475 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 NPHS2Q9NP85 383 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 SLC6A20Q9NP91 592 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 KLHL3Q9UH77 587 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 PCDHGA11Q9Y5H2 935 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 DMXL1Q9Y485 3027 aa21.75■■□□□ 1.07
ACTN4-210ENST00000588618 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.74■■□□□ 1.07
ACTN4-210ENST00000588618 FFAR3O14843 346 aa21.74■■□□□ 1.07
ACTN4-210ENST00000588618 GPR42O15529 346 aa21.74■■□□□ 1.07
ACTN4-210ENST00000588618 MAP3K7O43318 606 aa21.74■■□□□ 1.07
ACTN4-210ENST00000588618 KRT6AP02538 564 aa21.74■■□□□ 1.07
ACTN4-210ENST00000588618 KRT6BP04259 564 aa21.74■■□□□ 1.07
ACTN4-210ENST00000588618 GP1BAP07359 652 aa21.74■■□□□ 1.07
ACTN4-210ENST00000588618 MAGP20916 626 aa21.74■■□□□ 1.07
ACTN4-210ENST00000588618 ACP1P24666 158 aa21.74■■□□□ 1.07
ACTN4-210ENST00000588618 LSSP48449 732 aa21.74■■□□□ 1.07
ACTN4-210ENST00000588618 KRT6CP48668 564 aa21.74■■□□□ 1.07
ACTN4-210ENST00000588618 MEF2AQ02078 507 aaPredicted RBP21.74■■□□□ 1.07
ACTN4-210ENST00000588618 WDR74Q6RFH5 385 aaPredicted RBP21.74■■□□□ 1.07
ACTN4-210ENST00000588618 CHCHD4Q8N4Q1 142 aa21.74■■□□□ 1.07
ACTN4-210ENST00000588618 ZUFSPQ96AP4 578 aa21.74■■□□□ 1.07
ACTN4-210ENST00000588618 WDR34Q96EX3 536 aa21.74■■□□□ 1.07
ACTN4-210ENST00000588618 CCT8L2Q96SF2 557 aa21.74■■□□□ 1.07
ACTN4-210ENST00000588618 TRIM55Q9BYV6 548 aa21.74■■□□□ 1.07
ACTN4-210ENST00000588618 LRRN3Q9H3W5 708 aa21.74■■□□□ 1.07
ACTN4-210ENST00000588618 PFDN4Q9NQP4 134 aa21.74■■□□□ 1.07
ACTN4-210ENST00000588618 C1GALT1Q9NS00 363 aa21.74■■□□□ 1.07
ACTN4-210ENST00000588618 GEMIN8Q9NWZ8 242 aaKnown RBP21.74■■□□□ 1.07
ACTN4-210ENST00000588618 ANKMY1Q9P2S6 941 aa21.74■■□□□ 1.07
ACTN4-210ENST00000588618 VTI1BQ9UEU0 232 aa21.74■■□□□ 1.07
ACTN4-210ENST00000588618 KLHL20Q9Y2M5 609 aa21.74■■□□□ 1.07
ACTN4-210ENST00000588618 DNAJC15Q9Y5T4 150 aa21.74■■□□□ 1.07
ACTN4-210ENST00000588618 TLCD2A6NGC4 264 aa21.73■■□□□ 1.07
ACTN4-210ENST00000588618 CPNE6O95741 557 aa21.73■■□□□ 1.07
ACTN4-210ENST00000588618 GRIA3P42263 894 aa21.73■■□□□ 1.07
ACTN4-210ENST00000588618 HTR6P50406 440 aa21.73■■□□□ 1.07
ACTN4-210ENST00000588618 GFERP55789 205 aa21.73■■□□□ 1.07
ACTN4-210ENST00000588618 IFT88Q13099 833 aa21.73■■□□□ 1.07
ACTN4-210ENST00000588618 ZRSR2Q15696 482 aaKnown RBP21.73■■□□□ 1.07
ACTN4-210ENST00000588618 MED27Q6P2C8 311 aa21.73■■□□□ 1.07
ACTN4-210ENST00000588618 PITHD1Q9GZP4 211 aaPredicted RBP21.73■■□□□ 1.07
ACTN4-210ENST00000588618 SEMA6CQ9H3T2 930 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms