RNA–Protein interactions for RNA: ENST00000586975.1

CLPTM1-206, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-206ENST00000586975 PARP9Q8IXQ6 854 aa18.15■□□□□ 0.5
CLPTM1-206ENST00000586975 STT3BQ8TCJ2 826 aa18.15■□□□□ 0.5
CLPTM1-206ENST00000586975 CCDC138Q96M89 665 aa18.15■□□□□ 0.5
CLPTM1-206ENST00000586975 OR2A5Q96R48 311 aa18.15■□□□□ 0.5
CLPTM1-206ENST00000586975 ATG10Q9H0Y0 220 aa18.15■□□□□ 0.5
CLPTM1-206ENST00000586975 ENAMQ9NRM1 1142 aa18.15■□□□□ 0.5
CLPTM1-206ENST00000586975 TRPC4Q9UBN4 977 aa18.15■□□□□ 0.5
CLPTM1-206ENST00000586975 CDC14AQ9UNH5 594 aa18.15■□□□□ 0.5
CLPTM1-206ENST00000586975 PDE10AQ9Y233 779 aa18.15■□□□□ 0.5
CLPTM1-206ENST00000586975 HS3ST3B1Q9Y662 390 aa18.15■□□□□ 0.5
CLPTM1-206ENST00000586975 SPENQ96T58 3664 aaKnown RBP18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 PABPN1LA6NDY0 278 aaKnown RBP18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 VSTM2BA6NLU5 285 aa18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 KLHL41O60662 606 aa18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 SORBS2O94875 1100 aaKnown RBP18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 C8GP07360 202 aa18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 ZGLP1P0C6A0 271 aa18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 PGGT1BP53609 377 aa18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 ARL4CP56559 192 aa18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 TBPL1P62380 186 aa18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 MRPS25P82663 173 aaKnown RBP18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 KLC1Q07866 573 aa18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 PRR30Q53SZ7 412 aaPredicted RBP18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 VWA2Q5GFL6 755 aa18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 IRAK1BP1Q5VVH5 260 aa18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 PRAMEF13Q5VWM6 474 aa18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 HIBCHQ6NVY1 386 aaPredicted RBP18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 KIRREL2Q6UWL6 708 aa18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 KIAA0408Q6ZU52 694 aa18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 CNTN4Q8IWV2 1026 aa18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 LRRC56Q8IYG6 542 aaPredicted RBP18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 NACC2Q96BF6 587 aa18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 MMABQ96EY8 250 aaPredicted RBP18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 SNF8Q96H20 258 aa18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 KRT12Q99456 494 aa18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 ZNF552Q9H707 407 aaPredicted RBP18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 PARVBQ9HBI1 364 aa18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 SEMA3GQ9NS98 782 aa18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 C5AR2Q9P296 337 aa18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 C3orf18Q9UK00 162 aa18.14■□□□□ 0.49
CLPTM1-206ENST00000586975 NBASA2RRP1 2371 aa18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 CCDC88CQ9P219 2028 aa18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 COL12A1Q99715 3063 aa18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 EFCAB8A8MWE9 144 aa18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 CCDC188H7C350 402 aa18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 ANXA5P08758 320 aa18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 HIST1H2AGP0C0S8 130 aaPredicted RBP18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 HIST1H2ADP20671 130 aa18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 SAT1P21673 171 aa18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 CD97P48960 835 aa18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 NAE1Q13564 534 aa18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 UBAP2LQ14157 1087 aaKnown RBP18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 INPP5JQ15735 1006 aaPredicted RBP18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 TUBB8Q3ZCM7 444 aa18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 HECTD2Q5U5R9 776 aa18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 AGTRAPQ6RW13 159 aa18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 PNPLA2Q96AD5 504 aa18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 VPS50Q96JG6 964 aa18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 PDLIM2Q96JY6 352 aa18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 HIST1H2AHQ96KK5 128 aa18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 HIST1H2AJQ99878 128 aa18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 MESP1Q9BRJ9 268 aa18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 H2AFJQ9BTM1 129 aa18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 PLAC1Q9HBJ0 212 aa18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 MAP4K5Q9Y4K4 846 aa18.13■□□□□ 0.49
CLPTM1-206ENST00000586975 RELNP78509 3460 aa18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 A0A0A6YYC8 382 aaPredicted RBP18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 I3L1I5 382 aaPredicted RBP18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 TXNDC9O14530 226 aa18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 P2RX6O15547 441 aa18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 PRPF4O43172 522 aaKnown RBP eCLIP18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 IPO13O94829 963 aaKnown RBP18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 SEC31AO94979 1220 aaKnown RBP18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 GNLYP22749 145 aa18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 UQCRFS1P47985 274 aa18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 IL2P60568 153 aa18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 PDIA2Q13087 525 aaKnown RBP18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 SP140Q13342 867 aa18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 PHKG1Q16816 387 aa18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 PLEKHN1Q494U1 663 aaPredicted RBP18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 FAAH2Q6GMR7 532 aa18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 LAPTM4BQ86VI4 370 aa18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 ZADH2Q8N4Q0 377 aa18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 Q8NA96 180 aa18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 OR11G2Q8NGC1 345 aa18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 TM9SF4Q92544 642 aa18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 C8orf44Q96CB5 159 aa18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 LRRC39Q96DD0 335 aa18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 WDR83Q9BRX9 315 aaKnown RBP18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 DRC3Q9H069 523 aa18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 ILKAPQ9H0C8 392 aaPredicted RBP18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 ZBTB20Q9HC78 741 aaPredicted RBP18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 TMEM184CQ9NVA4 438 aa18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 VWA7Q9Y334 891 aa18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 SNX24Q9Y343 169 aa18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 TEX264Q9Y6I9 313 aa18.12■□□□□ 0.49
CLPTM1-206ENST00000586975 FLNCQ14315 2725 aa18.11■□□□□ 0.49
CLPTM1-206ENST00000586975 MAP2K7O14733 419 aa18.11■□□□□ 0.49
CLPTM1-206ENST00000586975 SLC16A5O15375 505 aa18.11■□□□□ 0.49
CLPTM1-206ENST00000586975 ACPPP15309 386 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms