RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.45■□□□□ 0.86
PPP4R1-228ENST00000584074 MED13Q9UHV7 2174 aa20.45■□□□□ 0.86
PPP4R1-228ENST00000584074 FLNCQ14315 2725 aa20.44■□□□□ 0.86
PPP4R1-228ENST00000584074 AGPSO00116 658 aa20.44■□□□□ 0.86
PPP4R1-228ENST00000584074 SLC16A5O15375 505 aa20.44■□□□□ 0.86
PPP4R1-228ENST00000584074 FDXRP22570 491 aa20.44■□□□□ 0.86
PPP4R1-228ENST00000584074 EMP3P54852 163 aa20.44■□□□□ 0.86
PPP4R1-228ENST00000584074 IL2P60568 153 aa20.44■□□□□ 0.86
PPP4R1-228ENST00000584074 RELAQ04206 551 aa20.44■□□□□ 0.86
PPP4R1-228ENST00000584074 SP140Q13342 867 aa20.44■□□□□ 0.86
PPP4R1-228ENST00000584074 FRG1Q14331 258 aaKnown RBP20.44■□□□□ 0.86
PPP4R1-228ENST00000584074 AGTRAPQ6RW13 159 aa20.44■□□□□ 0.86
PPP4R1-228ENST00000584074 RERGQ96A58 199 aaPredicted RBP20.44■□□□□ 0.86
PPP4R1-228ENST00000584074 SMAD5Q99717 465 aaKnown RBP20.44■□□□□ 0.86
PPP4R1-228ENST00000584074 MFRPQ9BY79 579 aa20.44■□□□□ 0.86
PPP4R1-228ENST00000584074 ATG10Q9H0Y0 220 aa20.44■□□□□ 0.86
PPP4R1-228ENST00000584074 FBXL4Q9UKA2 621 aa20.44■□□□□ 0.86
PPP4R1-228ENST00000584074 NXT1Q9UKK6 140 aaKnown RBP20.44■□□□□ 0.86
PPP4R1-228ENST00000584074 CORO1CQ9ULV4 474 aaPredicted RBP20.44■□□□□ 0.86
PPP4R1-228ENST00000584074 SH2B3Q9UQQ2 575 aa20.44■□□□□ 0.86
PPP4R1-228ENST00000584074 PSAT1Q9Y617 370 aa20.44■□□□□ 0.86
PPP4R1-228ENST00000584074 HS3ST3B1Q9Y662 390 aa20.44■□□□□ 0.86
PPP4R1-228ENST00000584074 FLNBO75369 2602 aaKnown RBP20.44■□□□□ 0.86
PPP4R1-228ENST00000584074 TTLL8A6PVC2 850 aa20.43■□□□□ 0.86
PPP4R1-228ENST00000584074 E7ESA3 106 aa20.43■□□□□ 0.86
PPP4R1-228ENST00000584074 SOCS6O14544 535 aa20.43■□□□□ 0.86
PPP4R1-228ENST00000584074 STATHP02808 62 aa20.43■□□□□ 0.86
PPP4R1-228ENST00000584074 FBLP22087 321 aaKnown RBP20.43■□□□□ 0.86
PPP4R1-228ENST00000584074 MGAT5Q09328 741 aa20.43■□□□□ 0.86
PPP4R1-228ENST00000584074 NAE1Q13564 534 aa20.43■□□□□ 0.86
PPP4R1-228ENST00000584074 MYBPC3Q14896 1274 aa20.43■□□□□ 0.86
PPP4R1-228ENST00000584074 PRAMEF13Q5VWM6 474 aa20.43■□□□□ 0.86
PPP4R1-228ENST00000584074 KIRREL2Q6UWL6 708 aa20.43■□□□□ 0.86
PPP4R1-228ENST00000584074 PRSS58Q8IYP2 241 aa20.43■□□□□ 0.86
PPP4R1-228ENST00000584074 SPATA4Q8NEY3 305 aa20.43■□□□□ 0.86
PPP4R1-228ENST00000584074 STT3BQ8TCJ2 826 aa20.43■□□□□ 0.86
PPP4R1-228ENST00000584074 MIB2Q96AX9 1013 aa20.43■□□□□ 0.86
PPP4R1-228ENST00000584074 NACC2Q96BF6 587 aa20.43■□□□□ 0.86
PPP4R1-228ENST00000584074 ALKBH8Q96BT7 664 aaKnown RBP20.43■□□□□ 0.86
PPP4R1-228ENST00000584074 MESP1Q9BRJ9 268 aa20.43■□□□□ 0.86
PPP4R1-228ENST00000584074 ZFATQ9P243 1243 aa20.43■□□□□ 0.86
PPP4R1-228ENST00000584074 COL12A1Q99715 3063 aa20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 P2RX6O15547 441 aa20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 DPM1O60762 260 aa20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 ALOX12BO75342 701 aa20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 ZGLP1P0C6A0 271 aa20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 OCA2Q04671 838 aa20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 KLC1Q07866 573 aa20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 VWA2Q5GFL6 755 aa20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 VWA5B1Q5TIE3 1220 aa20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 FAM45BPQ6NSW5 357 aa20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 JMJD6Q6NYC1 403 aaPredicted RBP20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 ZBED8Q8IZ13 594 aa20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 ARHGEF39Q8N4T4 335 aa20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 RBMXL3Q8N7X1 1067 aaKnown RBP20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 FAM45AQ8TCE6 357 aa20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 ERP44Q9BS26 406 aa20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 CRB3Q9BUF7 120 aa20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 PCBD2Q9H0N5 130 aa20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 DPH5Q9H2P9 285 aa20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 ATP13A2Q9NQ11 1180 aa20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 TMEM184CQ9NVA4 438 aa20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 MOCS1Q9NZB8 636 aa20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 LUZP4Q9P127 313 aa20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 ZNF282Q9UDV7 671 aaPredicted RBP20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 CDC14AQ9UNH5 594 aa20.42■□□□□ 0.86
PPP4R1-228ENST00000584074 CCDC88CQ9P219 2028 aa20.41■□□□□ 0.86
PPP4R1-228ENST00000584074 FFAR3O14843 346 aa20.41■□□□□ 0.86
PPP4R1-228ENST00000584074 GPR42O15529 346 aa20.41■□□□□ 0.86
PPP4R1-228ENST00000584074 HIST1H2AGP0C0S8 130 aaPredicted RBP20.41■□□□□ 0.86
PPP4R1-228ENST00000584074 HIST1H2ADP20671 130 aa20.41■□□□□ 0.86
PPP4R1-228ENST00000584074 SAT1P21673 171 aa20.41■□□□□ 0.86
PPP4R1-228ENST00000584074 SOX8P57073 446 aa20.41■□□□□ 0.86
PPP4R1-228ENST00000584074 DSG2Q14126 1118 aa20.41■□□□□ 0.86
PPP4R1-228ENST00000584074 RBBP7Q16576 425 aa20.41■□□□□ 0.86
PPP4R1-228ENST00000584074 ZXDCQ2QGD7 858 aaPredicted RBP20.41■□□□□ 0.86
PPP4R1-228ENST00000584074 STRA8Q7Z7C7 330 aa20.41■□□□□ 0.86
PPP4R1-228ENST00000584074 MIEF2Q96C03 454 aa20.41■□□□□ 0.86
PPP4R1-228ENST00000584074 HIST1H2AHQ96KK5 128 aa20.41■□□□□ 0.86
PPP4R1-228ENST00000584074 HIST1H2AJQ99878 128 aa20.41■□□□□ 0.86
PPP4R1-228ENST00000584074 H2AFJQ9BTM1 129 aa20.41■□□□□ 0.86
PPP4R1-228ENST00000584074 SGPP1Q9BX95 441 aa20.41■□□□□ 0.86
PPP4R1-228ENST00000584074 ZNF552Q9H707 407 aaPredicted RBP20.41■□□□□ 0.86
PPP4R1-228ENST00000584074 SEMA3GQ9NS98 782 aa20.41■□□□□ 0.86
PPP4R1-228ENST00000584074 ARL15Q9NXU5 204 aa20.41■□□□□ 0.86
PPP4R1-228ENST00000584074 TRPC4Q9UBN4 977 aa20.41■□□□□ 0.86
PPP4R1-228ENST00000584074 IKZF3Q9UKT9 509 aa20.41■□□□□ 0.86
PPP4R1-228ENST00000584074 IGLV3-12A0A075B6K2 115 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 FAM187AA6NFU0 413 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 RAD51CO43502 376 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 FOXS1O43638 330 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 PIAS1O75925 651 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 SORBS2O94875 1100 aaKnown RBP20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 HRH2P25021 359 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 CASQ1P31415 396 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 CD97P48960 835 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 ETF1P62495 437 aaKnown RBP20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 SNRPNP63162 240 aaKnown RBP20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 CSNK1G2P78368 415 aa20.4■□□□□ 0.86
PPP4R1-228ENST00000584074 C2orf54Q08AI8 447 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms