RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 TSTA3Q13630 321 aaPredicted RBP23.81■■□□□ 1.4
TSEN54-209ENST00000583454 BMPR2Q13873 1038 aa23.81■■□□□ 1.4
TSEN54-209ENST00000583454 TCTN3Q6NUS6 607 aa23.81■■□□□ 1.4
TSEN54-209ENST00000583454 ZNF517Q6ZMY9 492 aaPredicted RBP23.81■■□□□ 1.4
TSEN54-209ENST00000583454 CCDC91Q7Z6B0 441 aa23.81■■□□□ 1.4
TSEN54-209ENST00000583454 MCATQ8IVS2 390 aaKnown RBP23.81■■□□□ 1.4
TSEN54-209ENST00000583454 SPATA6LQ8N4H0 392 aa23.81■■□□□ 1.4
TSEN54-209ENST00000583454 UHMK1Q8TAS1 419 aaKnown RBP23.81■■□□□ 1.4
TSEN54-209ENST00000583454 ATL1Q8WXF7 558 aa23.81■■□□□ 1.4
TSEN54-209ENST00000583454 PAFAH2Q99487 392 aa23.81■■□□□ 1.4
TSEN54-209ENST00000583454 DPH7Q9BTV6 452 aa23.81■■□□□ 1.4
TSEN54-209ENST00000583454 SGPP1Q9BX95 441 aa23.81■■□□□ 1.4
TSEN54-209ENST00000583454 PCBD2Q9H0N5 130 aa23.81■■□□□ 1.4
TSEN54-209ENST00000583454 ATG10Q9H0Y0 220 aa23.81■■□□□ 1.4
TSEN54-209ENST00000583454 EPB41L4BQ9H329 900 aa23.81■■□□□ 1.4
TSEN54-209ENST00000583454 SLC6A20Q9NP91 592 aa23.81■■□□□ 1.4
TSEN54-209ENST00000583454 MRPS30Q9NP92 439 aaKnown RBP23.81■■□□□ 1.4
TSEN54-209ENST00000583454 CCDC177Q9NQR7 707 aaPredicted RBP23.81■■□□□ 1.4
TSEN54-209ENST00000583454 EURLQ9NYK6 297 aa23.81■■□□□ 1.4
TSEN54-209ENST00000583454 ZNF180Q9UJW8 692 aa23.81■■□□□ 1.4
TSEN54-209ENST00000583454 OARD1Q9Y530 152 aa23.81■■□□□ 1.4
TSEN54-209ENST00000583454 MDC1Q14676 2089 aaKnown RBP23.8■■□□□ 1.4
TSEN54-209ENST00000583454 IGKV1-8A0A0C4DH67 115 aa23.8■■□□□ 1.4
TSEN54-209ENST00000583454 OR2A25A4D2G3 310 aa23.8■■□□□ 1.4
TSEN54-209ENST00000583454 CTSVO60911 334 aa23.8■■□□□ 1.4
TSEN54-209ENST00000583454 SCRG1O75711 98 aa23.8■■□□□ 1.4
TSEN54-209ENST00000583454 CCNDBP1O95273 360 aa23.8■■□□□ 1.4
TSEN54-209ENST00000583454 PDGFAP04085 211 aa23.8■■□□□ 1.4
TSEN54-209ENST00000583454 SERPINB9P50453 376 aa23.8■■□□□ 1.4
TSEN54-209ENST00000583454 RPS18P62269 152 aaKnown RBP23.8■■□□□ 1.4
TSEN54-209ENST00000583454 TBPL1P62380 186 aa23.8■■□□□ 1.4
TSEN54-209ENST00000583454 SRSF1Q07955 248 aaKnown RBP eCLIP23.8■■□□□ 1.4
TSEN54-209ENST00000583454 NAE1Q13564 534 aa23.8■■□□□ 1.4
TSEN54-209ENST00000583454 DEFB110Q30KQ9 67 aa23.8■■□□□ 1.4
TSEN54-209ENST00000583454 ZC3H12BQ5HYM0 836 aaKnown RBP23.8■■□□□ 1.4
TSEN54-209ENST00000583454 TMEM126BQ8IUX1 230 aa23.8■■□□□ 1.4
TSEN54-209ENST00000583454 APLFQ8IW19 511 aaPredicted RBP23.8■■□□□ 1.4
TSEN54-209ENST00000583454 SLC38A9Q8NBW4 561 aa23.8■■□□□ 1.4
TSEN54-209ENST00000583454 OR56A3Q8NH54 315 aa23.8■■□□□ 1.4
TSEN54-209ENST00000583454 TRIM55Q9BYV6 548 aa23.8■■□□□ 1.4
TSEN54-209ENST00000583454 ENAMQ9NRM1 1142 aa23.8■■□□□ 1.4
TSEN54-209ENST00000583454 UTP6Q9NYH9 597 aaKnown RBP23.8■■□□□ 1.4
TSEN54-209ENST00000583454 ANKMY1Q9P2S6 941 aa23.8■■□□□ 1.4
TSEN54-209ENST00000583454 TLK1Q9UKI8 766 aa23.8■■□□□ 1.4
TSEN54-209ENST00000583454 NBPF19A0A087WUL8 3843 aa23.8■■□□□ 1.4
TSEN54-209ENST00000583454 PABPN1LA6NDY0 278 aaKnown RBP23.79■■□□□ 1.4
TSEN54-209ENST00000583454 RFPL1O75677 317 aa23.79■■□□□ 1.4
TSEN54-209ENST00000583454 GUCA1CO95843 209 aa23.79■■□□□ 1.4
TSEN54-209ENST00000583454 CTSBP07858 339 aa23.79■■□□□ 1.4
TSEN54-209ENST00000583454 CCND1P24385 295 aa23.79■■□□□ 1.4
TSEN54-209ENST00000583454 DEKP35659 375 aaKnown RBP23.79■■□□□ 1.4
TSEN54-209ENST00000583454 MSH2P43246 934 aa23.79■■□□□ 1.4
TSEN54-209ENST00000583454 KLRB1Q12918 225 aa23.79■■□□□ 1.4
TSEN54-209ENST00000583454 GPS2Q13227 327 aa23.79■■□□□ 1.4
TSEN54-209ENST00000583454 THEMIS2Q5TEJ8 643 aa23.79■■□□□ 1.4
TSEN54-209ENST00000583454 ZNF425Q6IV72 752 aa23.79■■□□□ 1.4
TSEN54-209ENST00000583454 RAPH1Q70E73 1250 aa23.79■■□□□ 1.4
TSEN54-209ENST00000583454 DCAKDQ8WVC6 231 aa23.79■■□□□ 1.4
TSEN54-209ENST00000583454 N4BP2L2Q92802 583 aaPredicted RBP23.79■■□□□ 1.4
TSEN54-209ENST00000583454 LRFN5Q96NI6 719 aa23.79■■□□□ 1.4
TSEN54-209ENST00000583454 ZNF285Q96NJ3 590 aa23.79■■□□□ 1.4
TSEN54-209ENST00000583454 PLCD4Q9BRC7 762 aa23.79■■□□□ 1.4
TSEN54-209ENST00000583454 DHRS4Q9BTZ2 278 aa23.79■■□□□ 1.4
TSEN54-209ENST00000583454 UNKQ9C0B0 810 aaKnown RBP23.79■■□□□ 1.4
TSEN54-209ENST00000583454 SPRTNQ9H040 489 aaPredicted RBP23.79■■□□□ 1.4
TSEN54-209ENST00000583454 SNX7Q9UNH6 387 aa23.79■■□□□ 1.4
TSEN54-209ENST00000583454 ACOT9Q9Y305 439 aa23.79■■□□□ 1.4
TSEN54-209ENST00000583454 IKBKGQ9Y6K9 419 aa23.79■■□□□ 1.4
TSEN54-209ENST00000583454 E7EQ34 232 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 POC1B-GALNT4F8VUJ3 575 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 MKRN2OSH3BPM6 223 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 CPNE3O75131 537 aaKnown RBP23.78■■□□□ 1.4
TSEN54-209ENST00000583454 DNAJB5O75953 348 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 OR2B3O76000 313 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 ALDOAP04075 364 aaKnown RBP23.78■■□□□ 1.4
TSEN54-209ENST00000583454 C2P06681 752 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 PTPN4P29074 926 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 GMPRP36959 345 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 RELAQ04206 551 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 DLG1Q12959 904 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 IL10RAQ13651 578 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 CSHL1Q14406 222 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 SLC29A2Q14542 456 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 UGT8Q16880 541 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 PRAMEF17Q5VTA0 474 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 PRAMEF13Q5VWM6 474 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 FBXO42Q6P3S6 717 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 PAQR7Q86WK9 346 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 GPR135Q8IZ08 494 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 ISL2Q96A47 359 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 KIAA1191Q96A73 305 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 PTERQ96BW5 349 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 GPR87Q9BY21 358 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 SNX15Q9NRS6 342 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 IGSF5Q9NSI5 407 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 MAN2B2Q9Y2E5 1009 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 AP1M2Q9Y6Q5 423 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 PCSK5Q92824 1860 aa23.78■■□□□ 1.4
TSEN54-209ENST00000583454 EXOC1LA0A1B0GW35 172 aa23.77■■□□□ 1.4
TSEN54-209ENST00000583454 NRP2O60462 931 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms