RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 PRPF18Q99633 342 aaKnown RBP8.98□□□□□ -0.97
SS18-220ENST00000582092 SH3GL1Q99961 368 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 TACO1Q9BSH4 297 aaKnown RBP8.98□□□□□ -0.97
SS18-220ENST00000582092 EFHD1Q9BUP0 239 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 ZDHHC5Q9C0B5 715 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 OR52A5Q9H2C5 316 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 MVB12BQ9H7P6 319 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 CARS2Q9HA77 564 aaKnown RBP8.98□□□□□ -0.97
SS18-220ENST00000582092 BRF2Q9HAW0 419 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 CD248Q9HCU0 757 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 PARD6AQ9NPB6 346 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 FARSBQ9NSD9 589 aaKnown RBP8.98□□□□□ -0.97
SS18-220ENST00000582092 DLL3Q9NYJ7 618 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 AHSPQ9NZD4 102 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 SPATA7Q9P0W8 599 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 VPS29Q9UBQ0 182 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 CYP8B1Q9UNU6 501 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 RUVBL1Q9Y265 456 aaKnown RBP8.98□□□□□ -0.97
SS18-220ENST00000582092 AP3M1Q9Y2T2 418 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 VPS13AQ96RL7 3174 aa8.98□□□□□ -0.97
SS18-220ENST00000582092 IGHV1OR15-9A0A0B4J2B8 117 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 ANKDD1BA6NHY2 528 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 E7ENX8 843 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 H0YIV9 168 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 FBP2O00757 339 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 TOR1BO14657 336 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 SLC30A4O14863 429 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 EEDO75530 441 aaKnown RBP8.97□□□□□ -0.97
SS18-220ENST00000582092 ANP32DO95626 131 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 SEMA4FO95754 770 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 SYPP08247 313 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 BCKDHBP21953 392 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 TGM1P22735 817 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 VARSP26640 1264 aaKnown RBP8.97□□□□□ -0.97
SS18-220ENST00000582092 RPL10P27635 214 aaKnown RBP8.97□□□□□ -0.97
SS18-220ENST00000582092 ACADLP28330 430 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 IGFALSP35858 605 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 ASMTP46597 345 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 SLC7A2P52569 658 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 KIAA1024LP59773 190 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 TRAP1Q12931 704 aaKnown RBP8.97□□□□□ -0.97
SS18-220ENST00000582092 SLBPQ14493 270 aaKnown RBP eCLIP8.97□□□□□ -0.97
SS18-220ENST00000582092 RBBP5Q15291 538 aaKnown RBP8.97□□□□□ -0.97
SS18-220ENST00000582092 MAPKAPK3Q16644 382 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 ZNF423Q2M1K9 1284 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 MUM1Q2TAK8 710 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 CCSMST1Q4G0I0 132 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 TIGD2Q4W5G0 525 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 RFTN2Q52LD8 501 aaPredicted RBP8.97□□□□□ -0.97
SS18-220ENST00000582092 PIGGQ5H8A4 983 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 PLA2G2CQ5R387 149 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 C6orf10Q5SRN2 563 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 ATG9BQ674R7 924 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 NXPE4Q6UWF7 544 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 SUSD1Q6UWL2 747 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 LCTLQ6UWM7 567 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 FAM83HQ6ZRV2 1179 aaPredicted RBP8.97□□□□□ -0.97
SS18-220ENST00000582092 RASGRP3Q8IV61 690 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 FUNDC1Q8IVP5 155 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 PHACTR4Q8IZ21 702 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 MINDY1Q8N5J2 469 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 RNF148Q8N7C7 305 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 ENDOVQ8N8Q3 282 aaKnown RBP8.97□□□□□ -0.97
SS18-220ENST00000582092 VPS37AQ8NEZ2 397 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 TNIP2Q8NFZ5 429 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 OR5AR1Q8NGP9 310 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 OR5K2Q8NHB8 316 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 DNAJB8Q8NHS0 232 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 CDC26Q8NHZ8 85 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 SLC5A11Q8WWX8 675 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 SMPDL3AQ92484 453 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 SNX19Q92543 992 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 VPS33AQ96AX1 596 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 LRRC58Q96CX6 371 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 METTL2AQ96IZ6 378 aaKnown RBP8.97□□□□□ -0.97
SS18-220ENST00000582092 APOLD1Q96LR9 279 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 WDR92Q96MX6 357 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 OR2M4Q96R27 311 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 OR52E6Q96RD3 313 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 MTERF1Q99551 399 aaKnown RBP8.97□□□□□ -0.97
SS18-220ENST00000582092 AIF1LQ9BQI0 150 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 CENPKQ9BS16 269 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 PCED1AQ9H1Q7 454 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 S100A14Q9HCY8 104 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 FZD3Q9NPG1 666 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 IMP3Q9NV31 184 aaKnown RBP8.97□□□□□ -0.97
SS18-220ENST00000582092 ASIC5Q9NY37 505 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 STX18Q9P2W9 335 aaKnown RBP8.97□□□□□ -0.97
SS18-220ENST00000582092 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.97□□□□□ -0.97
SS18-220ENST00000582092 SLC23A2Q9UGH3 650 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 ADGRE2Q9UHX3 823 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 SUFUQ9UMX1 484 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 KCNK6Q9Y257 313 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 SLC17A4Q9Y2C5 497 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 PCDHGA7Q9Y5G6 932 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 HS3ST3A1Q9Y663 406 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 CFAP20Q9Y6A4 193 aaKnown RBP8.97□□□□□ -0.97
SS18-220ENST00000582092 CEP250Q9BV73 2442 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 LRRK1Q38SD2 2015 aa8.97□□□□□ -0.97
SS18-220ENST00000582092 ADAMTS9Q9P2N4 1935 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms