RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 TEX15Q9BXT5 2789 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 NBASA2RRP1 2371 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 CCDC187A0A096LP49 1063 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 FAM237BA0A1B0GVD1 139 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 A0A1W2PRV1 198 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 TRBC2A0A5B9 178 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 NEMP2A6NFY4 417 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 TMEM202A6NGA9 273 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 ERICH4A6NGS2 130 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 WASH4PA8MWX3 477 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 BOLA2-SMG1P6H3BVE0 249 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 J3KR12 359 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 YY2O15391 372 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 PRPF4O43172 522 aaKnown RBP eCLIP4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 RIPK2O43353 540 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 KDELR3O43731 214 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 RRP9O43818 475 aaKnown RBP4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 NOBOXO60393 691 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 KLHL41O60662 606 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 HNRNPCL1O60812 293 aaKnown RBP4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 BCAS2O75934 225 aaPredicted RBP4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 TM7SF2O76062 418 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 IGSF6O95976 241 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 PCCBP05166 539 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 TUBBP07437 444 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 ENO2P09104 434 aaPredicted RBP4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 ITIH1P19827 911 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 CCNA2P20248 432 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 EPHB2P29323 1055 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 ACAA2P42765 397 aaKnown RBP4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 SSR1P43307 286 aaKnown RBP4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 SLC15A1P46059 708 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 DUSP3P51452 185 aaPredicted RBP4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 ZNF81P51508 661 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 LUMP51884 338 aaPredicted RBP4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 THOP1P52888 689 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 UCNP55089 124 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 BPIFB4P59827 614 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 RHOAP61586 193 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 SNRPD1P62314 119 aaKnown RBP4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 TUBB4BP68371 445 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 OLR1P78380 273 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 SLC20A2Q08357 652 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 TMEM115Q12893 351 aaPredicted RBP4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 SP140Q13342 867 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 TUBB3Q13509 450 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 BOP1Q14137 746 aaKnown RBP4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 KCNAB1Q14722 419 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 SYCP1Q15431 976 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 CYTH1Q15438 398 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 TGIF1Q15583 401 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 TPD52L1Q16890 204 aaPredicted RBP4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 MYLK3Q32MK0 819 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 TMEM52BQ4KMG9 183 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 HS1BP3Q53T59 392 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 SPDYAQ5MJ70 313 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 CRYBG3Q68DQ2 2970 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 CDC73Q6P1J9 531 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 WDR59Q6PJI9 974 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 RBM43Q6ZSC3 357 aaKnown RBP4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 ADGRG6Q86SQ4 1221 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 TMEM200AQ86VY9 491 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 ZNF677Q86XU0 584 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 PHF13Q86YI8 300 aaPredicted RBP4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 ARFGAP1Q8N6T3 406 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 CCL4L1Q8NHW4 92 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 WDR48Q8TAF3 677 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 CXorf40AQ8TE69 158 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 OR1E3Q8WZA6 343 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 NAT6Q93015 286 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 TSACCQ96A04 125 aaPredicted RBP4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 INTS12Q96CB8 462 aaKnown RBP4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 ECHDC3Q96DC8 303 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 ZDHHC12Q96GR4 267 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 CELF6Q96J87 481 aaKnown RBP4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 SLC46A1Q96NT5 459 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 WDR24Q96S15 920 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 IL12RB2Q99665 862 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 TXN2Q99757 166 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 MESP1Q9BRJ9 268 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 SLC25A23Q9BV35 468 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 PACSIN1Q9BY11 444 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 TRIM7Q9C029 511 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 TTYH3Q9C0H2 523 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 TINAGL1Q9GZM7 467 aaPredicted RBP4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 SERHL2Q9H4I8 314 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 EPB41L5Q9HCM4 733 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 MRPL40Q9NQ50 206 aaKnown RBP4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 ALKBH4Q9NXW9 302 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 MOCS1Q9NZB8 636 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 NINJ2Q9NZG7 142 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 FOXJ2Q9P0K8 574 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 SPASTQ9UBP0 616 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 APPL1Q9UKG1 709 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 FZD10Q9ULW2 581 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 OSGIN2Q9Y236 505 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 CLDN16Q9Y5I7 305 aa4.74□□□□□ -1.65
GAPLINC-202ENST00000579007 SPTAN1Q13813 2472 aaKnown RBP4.73□□□□□ -1.65
GAPLINC-202ENST00000579007 SNRNP200O75643 2136 aaKnown RBP4.73□□□□□ -1.65
GAPLINC-202ENST00000579007 OR2A25A4D2G3 310 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms