RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 LRRN3Q9H3W5 708 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 OSGEPL1Q9H4B0 414 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 MVB12BQ9H7P6 319 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 VPS37BQ9H9H4 285 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 SNX15Q9NRS6 342 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 IMP3Q9NV31 184 aaKnown RBP3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 NSMCE4AQ9NXX6 385 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 SPHK1Q9NYA1 384 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 TAS2R13Q9NYV9 303 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 NCKIPSDQ9NZQ3 722 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 LRIT1Q9P2V4 623 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 EPHA6Q9UF33 1036 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 POMT2Q9UKY4 750 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 EMCNQ9ULC0 261 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 PLAGL1Q9UM63 463 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 SH2B3Q9UQQ2 575 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 PDE10AQ9Y233 779 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 VWA7Q9Y334 891 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 ASB1Q9Y576 335 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 KLK4Q9Y5K2 254 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 ENTPD2Q9Y5L3 495 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 CFAP47Q6ZTR5 3102 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 ACACBO00763 2458 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 PKD1L2Q7Z442 2459 aa3.66□□□□□ -1.82
SMARCE1-215ENST00000578995 IGHV5-51A0A0C4DH38 117 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 EXOC1LA0A1B0GW35 172 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 CPED1A4D0V7 1026 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 NPEPPSL1A6NEC2 478 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 TRIM49D1C9J1S8 452 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 E7ENX8 843 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 RASGRF2O14827 1237 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 SLC16A5O15375 505 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 TAPBPO15533 448 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 KIF1CO43896 1103 aaKnown RBP3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 PRAMEF10O60809 474 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 CPNE6O95741 557 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 SLC16A8O95907 504 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 TBX6O95947 436 aaPredicted RBP3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 RPLP0P05388 317 aaKnown RBP3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 CHRM5P08912 532 aaPredicted RBP3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 SLC2A4P14672 509 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 CREB1P16220 341 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 VCLP18206 1134 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 CHRM3P20309 590 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 PSMB5P28074 263 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 PHBP35232 272 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 SPRP35270 261 aaPredicted RBP3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 GGT5P36269 586 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 PPARGP37231 505 aaPredicted RBP3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 SLC26A3P40879 764 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 ETV5P41161 510 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 HALP42357 657 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 KIR3DL1P43629 444 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 ID4P47928 161 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 SLC6A12P48065 614 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 SERPINB9P50453 376 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 SHC2P98077 582 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 DAB2P98082 770 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 CDKL1Q00532 357 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 PLOD1Q02809 727 aaPredicted RBP3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 TAP2Q03519 686 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 CHRNEQ04844 493 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 SLC18A2Q05940 514 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 ILF2Q12905 390 aaKnown RBP3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 ABRQ12979 859 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 PRKG2Q13237 762 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 SP140Q13342 867 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 TMED2Q15363 201 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 TSNQ15631 228 aaKnown RBP3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 ZIC1Q15915 447 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 CLPPQ16740 277 aaPredicted RBP3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 ISXQ2M1V0 245 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 C18orf21Q32NC0 220 aaPredicted RBP3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 SYTL3Q4VX76 610 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 MROH9Q5TGP6 573 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 HES3Q5TGS1 186 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 NKAIN2Q5VXU1 208 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 CES4AQ5XG92 561 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 FAM219BQ5XKK7 198 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 ZNF425Q6IV72 752 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 UGT3A1Q6NUS8 523 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 FBXO38Q6PIJ6 1188 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 WDR74Q6RFH5 385 aaPredicted RBP3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 PRSS42Q7Z5A4 293 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 SLC9B2Q86UD5 537 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 TRABD2AQ86V40 505 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 CTAGE3PQ8IX95 158 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 SPATA6LQ8N4H0 392 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 OTUD6BQ8N6M0 293 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 GPATCH11Q8N954 259 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 PDPRQ8NCN5 879 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 OR6C4Q8NGE1 309 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 OR4D9Q8NGE8 314 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 OR6Y1Q8NGX8 325 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 OR2L8Q8NGY9 312 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 OR56A3Q8NH54 315 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 UBTD2Q8WUN7 234 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 KCTD4Q8WVF5 259 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 KLHL6Q8WZ60 621 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 CDKL2Q92772 493 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms