RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 AP3M1Q9Y2T2 418 aa9.79□□□□□ -0.84
SMG6-213ENST00000573166 ARHGEF33A8MVX0 844 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 KLF11O14901 512 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 AGXTP21549 392 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 HK3P52790 923 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 HSPB3Q12988 150 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 COL9A2Q14055 689 aaPredicted RBP9.78□□□□□ -0.84
SMG6-213ENST00000573166 HKDC1Q2TB90 917 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 FAM214AQ32MH5 1076 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 LACTB2Q53H82 288 aaPredicted RBP9.78□□□□□ -0.84
SMG6-213ENST00000573166 UNC50Q53HI1 259 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 HENMT1Q5T8I9 393 aaKnown RBP9.78□□□□□ -0.84
SMG6-213ENST00000573166 ALG1LQ6GMV1 187 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 ZCCHC8Q6NZY4 707 aaKnown RBP9.78□□□□□ -0.84
SMG6-213ENST00000573166 PAOXQ6QHF9 649 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 FAM92BQ6ZTR7 304 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 MRGPRX3Q96LB0 322 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 CNPPD1Q9BV87 410 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 REXO4Q9GZR2 422 aaKnown RBP9.78□□□□□ -0.84
SMG6-213ENST00000573166 FGF22Q9HCT0 170 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 MKS1Q9NXB0 559 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 SPATA7Q9P0W8 599 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 FTSJ1Q9UET6 329 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 TMCC3Q9ULS5 477 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 SNX13Q9Y5W8 968 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 DYTNA2CJ06 578 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 FAM47E-STBD1D6RA91 191 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 AQP9O43315 295 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 HRH2P25021 359 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 KLC1Q07866 573 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 C18orf21Q32NC0 220 aaPredicted RBP9.78□□□□□ -0.84
SMG6-213ENST00000573166 OR52B6Q8NGF0 335 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 PNPT1Q8TCS8 783 aaKnown RBP9.78□□□□□ -0.84
SMG6-213ENST00000573166 ACTRT2Q8TDY3 377 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 ADAMTS15Q8TE58 950 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 XAGE5Q8WWM1 108 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 SPAG4Q9NPE6 437 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 IGSF5Q9NSI5 407 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 TRNAU1APQ9NX07 287 aaKnown RBP9.78□□□□□ -0.84
SMG6-213ENST00000573166 ADPRHL2Q9NX46 363 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 KLHL42Q9P2K6 505 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 CPNE7Q9UBL6 633 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 ZNF232Q9UNY5 417 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 HS3ST3A1Q9Y663 406 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 FADS2P1A8MWK0 482 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 AREL1O15033 823 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 CDH2P19022 906 aaPredicted RBP9.78□□□□□ -0.84
SMG6-213ENST00000573166 GGT5P36269 586 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 SLC7A2P52569 658 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 SPIN4Q56A73 249 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 LIPJQ5W064 366 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 CYP4Z1Q86W10 505 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 TMCO5AQ8N6Q1 288 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 PROX1Q92786 737 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 OR52B2Q96RD2 323 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 C17orf62Q9BQA9 187 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 STRADBQ9C0K7 418 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 NKX1-2Q9UD57 310 aaPredicted RBP9.78□□□□□ -0.84
SMG6-213ENST00000573166 KLHL20Q9Y2M5 609 aa9.78□□□□□ -0.84
SMG6-213ENST00000573166 C17orf113A0A1B0GUU1 675 aa9.77□□□□□ -0.84
SMG6-213ENST00000573166 TMEM202A6NGA9 273 aa9.77□□□□□ -0.84
SMG6-213ENST00000573166 FZD6O60353 706 aa9.77□□□□□ -0.84
SMG6-213ENST00000573166 UNC5CO95185 931 aa9.77□□□□□ -0.84
SMG6-213ENST00000573166 CDKN3Q16667 212 aa9.77□□□□□ -0.84
SMG6-213ENST00000573166 TMEM259Q4ZIN3 620 aa9.77□□□□□ -0.84
SMG6-213ENST00000573166 PIP5KL1Q5T9C9 394 aa9.77□□□□□ -0.84
SMG6-213ENST00000573166 ARHGAP40Q5TG30 622 aa9.77□□□□□ -0.84
SMG6-213ENST00000573166 AGBL4Q5VU57 503 aa9.77□□□□□ -0.84
SMG6-213ENST00000573166 GATAD2AQ86YP4 633 aa9.77□□□□□ -0.84
SMG6-213ENST00000573166 TMEM126BQ8IUX1 230 aa9.77□□□□□ -0.84
SMG6-213ENST00000573166 RIN3Q8TB24 985 aa9.77□□□□□ -0.84
SMG6-213ENST00000573166 SLC9A6Q92581 669 aa9.77□□□□□ -0.84
SMG6-213ENST00000573166 SPAG17Q6Q759 2223 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 CXorf51AA0A1B0GTR3 108 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 ZNF860A6NHJ4 632 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 PCSK2P16519 638 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 PPIBP23284 216 aaKnown RBP9.77□□□□□ -0.85
SMG6-213ENST00000573166 CCT8P50990 548 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 XIAPP98170 497 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 TRMT5Q32P41 509 aaKnown RBP9.77□□□□□ -0.85
SMG6-213ENST00000573166 FAM98BQ52LJ0 330 aaKnown RBP9.77□□□□□ -0.85
SMG6-213ENST00000573166 ZSWIM9Q86XI8 627 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 SAMD14Q8IZD0 417 aaPredicted RBP9.77□□□□□ -0.85
SMG6-213ENST00000573166 GALNT4Q8N4A0 578 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 OR1E3Q8WZA6 343 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 FBXL8Q96CD0 374 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 PDXPQ96GD0 296 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 DUSP23Q9BVJ7 150 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 C1QTNF2Q9BXJ5 285 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 GAREM1Q9H706 876 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 ARL8BQ9NVJ2 186 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 GVINP1Q7Z2Y8 2422 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 ZNF23P17027 643 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 ATP6V1B2P21281 511 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 ATP6V1E1P36543 226 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 PGDP52209 483 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 MAPK10P53779 464 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 ALDH6A1Q02252 535 aaKnown RBP9.77□□□□□ -0.85
SMG6-213ENST00000573166 SRSF11Q05519 484 aaKnown RBP9.77□□□□□ -0.85
SMG6-213ENST00000573166 FIGLAQ6QHK4 219 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms