RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 HAT1O14929 419 aa17.22■□□□□ 0.35
CHD3-214ENST00000572579 PFDN6O15212 129 aa17.22■□□□□ 0.35
CHD3-214ENST00000572579 IPO13O94829 963 aaKnown RBP17.22■□□□□ 0.35
CHD3-214ENST00000572579 CELA2AP08217 269 aa17.22■□□□□ 0.35
CHD3-214ENST00000572579 MPC1LP0DKB6 136 aa17.22■□□□□ 0.35
CHD3-214ENST00000572579 ERVK-10P10266 1014 aa17.22■□□□□ 0.35
CHD3-214ENST00000572579 IVDP26440 423 aa17.22■□□□□ 0.35
CHD3-214ENST00000572579 GLRBP48167 497 aa17.22■□□□□ 0.35
CHD3-214ENST00000572579 THOC5Q13769 683 aaKnown RBP17.22■□□□□ 0.35
CHD3-214ENST00000572579 DSG2Q14126 1118 aa17.22■□□□□ 0.35
CHD3-214ENST00000572579 MUM1Q2TAK8 710 aa17.22■□□□□ 0.35
CHD3-214ENST00000572579 TUBB8Q3ZCM7 444 aa17.22■□□□□ 0.35
CHD3-214ENST00000572579 MIEF2Q96C03 454 aa17.22■□□□□ 0.35
CHD3-214ENST00000572579 THOC3Q96J01 351 aaKnown RBP17.22■□□□□ 0.35
CHD3-214ENST00000572579 CABS1Q96KC9 395 aa17.22■□□□□ 0.35
CHD3-214ENST00000572579 PRAP1Q96NZ9 151 aa17.22■□□□□ 0.35
CHD3-214ENST00000572579 NDNQ99608 321 aa17.22■□□□□ 0.35
CHD3-214ENST00000572579 MACROD1Q9BQ69 325 aa17.22■□□□□ 0.35
CHD3-214ENST00000572579 WDR77Q9BQA1 342 aaPredicted RBP17.22■□□□□ 0.35
CHD3-214ENST00000572579 LHPPQ9H008 270 aa17.22■□□□□ 0.35
CHD3-214ENST00000572579 ILKAPQ9H0C8 392 aaPredicted RBP17.22■□□□□ 0.35
CHD3-214ENST00000572579 ZNF160Q9HCG1 818 aa17.22■□□□□ 0.35
CHD3-214ENST00000572579 FAM114A2Q9NRY5 505 aa17.22■□□□□ 0.35
CHD3-214ENST00000572579 IARS2Q9NSE4 1012 aaKnown RBP17.22■□□□□ 0.35
CHD3-214ENST00000572579 ABCF3Q9NUQ8 709 aa17.22■□□□□ 0.35
CHD3-214ENST00000572579 SLC17A6Q9P2U8 582 aa17.22■□□□□ 0.35
CHD3-214ENST00000572579 PLEKHB1Q9UF11 243 aaPredicted RBP17.22■□□□□ 0.35
CHD3-214ENST00000572579 NOVA2Q9UNW9 492 aaKnown RBP17.22■□□□□ 0.35
CHD3-214ENST00000572579 VPS9D1Q9Y2B5 631 aa17.22■□□□□ 0.35
CHD3-214ENST00000572579 UNC79Q9P2D8 2635 aa17.22■□□□□ 0.35
CHD3-214ENST00000572579 DOCK10Q96BY6 2186 aa17.22■□□□□ 0.35
CHD3-214ENST00000572579 MDC1Q14676 2089 aaKnown RBP17.21■□□□□ 0.35
CHD3-214ENST00000572579 PGRMC1O00264 195 aaKnown RBP17.21■□□□□ 0.35
CHD3-214ENST00000572579 PHF2O75151 1096 aa17.21■□□□□ 0.35
CHD3-214ENST00000572579 COX6A1P12074 109 aa17.21■□□□□ 0.35
CHD3-214ENST00000572579 FBLP22087 321 aaKnown RBP17.21■□□□□ 0.35
CHD3-214ENST00000572579 HSD17B2P37059 387 aa17.21■□□□□ 0.35
CHD3-214ENST00000572579 CDKN2DP55273 166 aa17.21■□□□□ 0.35
CHD3-214ENST00000572579 MAT1AQ00266 395 aaKnown RBP17.21■□□□□ 0.35
CHD3-214ENST00000572579 RELAQ04206 551 aa17.21■□□□□ 0.35
CHD3-214ENST00000572579 AGAP7PQ5VUJ5 663 aa17.21■□□□□ 0.35
CHD3-214ENST00000572579 MBOAT1Q6ZNC8 495 aa17.21■□□□□ 0.35
CHD3-214ENST00000572579 VN1R4Q7Z5H5 301 aa17.21■□□□□ 0.35
CHD3-214ENST00000572579 C2CD4AQ8NCU7 369 aaPredicted RBP17.21■□□□□ 0.35
CHD3-214ENST00000572579 PPP4R1Q8TF05 950 aa17.21■□□□□ 0.35
CHD3-214ENST00000572579 EEF1AKMT1Q8WVE0 214 aa17.21■□□□□ 0.35
CHD3-214ENST00000572579 PWWP2AQ96N64 755 aa17.21■□□□□ 0.35
CHD3-214ENST00000572579 AGAP4Q96P64 663 aa17.21■□□□□ 0.35
CHD3-214ENST00000572579 WDR83Q9BRX9 315 aaKnown RBP17.21■□□□□ 0.35
CHD3-214ENST00000572579 TRPC4Q9UBN4 977 aa17.21■□□□□ 0.35
CHD3-214ENST00000572579 PCYOX1Q9UHG3 505 aa17.21■□□□□ 0.35
CHD3-214ENST00000572579 COPG1Q9Y678 874 aaKnown RBP17.21■□□□□ 0.35
CHD3-214ENST00000572579 TEX15Q9BXT5 2789 aa17.21■□□□□ 0.35
CHD3-214ENST00000572579 DOPEY1Q5JWR5 2465 aa17.21■□□□□ 0.34
CHD3-214ENST00000572579 A0A0A6YYC8 382 aaPredicted RBP17.2■□□□□ 0.34
CHD3-214ENST00000572579 A0A1W2PQ72 361 aa17.2■□□□□ 0.34
CHD3-214ENST00000572579 IDSB3KWA1 339 aa17.2■□□□□ 0.34
CHD3-214ENST00000572579 I3L1I5 382 aaPredicted RBP17.2■□□□□ 0.34
CHD3-214ENST00000572579 SYF2O95926 243 aaKnown RBP17.2■□□□□ 0.34
CHD3-214ENST00000572579 HPP00738 406 aa17.2■□□□□ 0.34
CHD3-214ENST00000572579 VARSP26640 1264 aaKnown RBP17.2■□□□□ 0.34
CHD3-214ENST00000572579 OCA2Q04671 838 aa17.2■□□□□ 0.34
CHD3-214ENST00000572579 DHX9Q08211 1270 aaKnown RBP17.2■□□□□ 0.34
CHD3-214ENST00000572579 RBM20Q5T481 1227 aaKnown RBP17.2■□□□□ 0.34
CHD3-214ENST00000572579 LINC00696Q6ZRV3 163 aa17.2■□□□□ 0.34
CHD3-214ENST00000572579 UBE2R2Q712K3 238 aaPredicted RBP17.2■□□□□ 0.34
CHD3-214ENST00000572579 PRSS41Q7RTY9 318 aa17.2■□□□□ 0.34
CHD3-214ENST00000572579 ZC3H7AQ8IWR0 971 aaKnown RBP17.2■□□□□ 0.34
CHD3-214ENST00000572579 PPIL6Q8IXY8 311 aa17.2■□□□□ 0.34
CHD3-214ENST00000572579 DNAJB14Q8TBM8 379 aa17.2■□□□□ 0.34
CHD3-214ENST00000572579 CCDC138Q96M89 665 aa17.2■□□□□ 0.34
CHD3-214ENST00000572579 KCNF1Q9H3M0 494 aa17.2■□□□□ 0.34
CHD3-214ENST00000572579 PDE10AQ9Y233 779 aa17.2■□□□□ 0.34
CHD3-214ENST00000572579 A1L4Q6 167 aa17.19■□□□□ 0.34
CHD3-214ENST00000572579 OR2W5A6NFC9 320 aa17.19■□□□□ 0.34
CHD3-214ENST00000572579 E2F3O00716 465 aa17.19■□□□□ 0.34
CHD3-214ENST00000572579 JRKO75564 520 aa17.19■□□□□ 0.34
CHD3-214ENST00000572579 CLDN1O95832 211 aa17.19■□□□□ 0.34
CHD3-214ENST00000572579 TSPAN12O95859 305 aa17.19■□□□□ 0.34
CHD3-214ENST00000572579 LDLRP01130 860 aa17.19■□□□□ 0.34
CHD3-214ENST00000572579 AHSGP02765 367 aa17.19■□□□□ 0.34
CHD3-214ENST00000572579 ENO3P13929 434 aaPredicted RBP17.19■□□□□ 0.34
CHD3-214ENST00000572579 ACPPP15309 386 aa17.19■□□□□ 0.34
CHD3-214ENST00000572579 EZRP15311 586 aaKnown RBP17.19■□□□□ 0.34
CHD3-214ENST00000572579 SOX11P35716 441 aa17.19■□□□□ 0.34
CHD3-214ENST00000572579 FNTAP49354 379 aa17.19■□□□□ 0.34
CHD3-214ENST00000572579 CARSP49589 748 aaKnown RBP17.19■□□□□ 0.34
CHD3-214ENST00000572579 EMP2P54851 167 aa17.19■□□□□ 0.34
CHD3-214ENST00000572579 ABATP80404 500 aa17.19■□□□□ 0.34
CHD3-214ENST00000572579 CRYMQ14894 314 aa17.19■□□□□ 0.34
CHD3-214ENST00000572579 PHKG1Q16816 387 aa17.19■□□□□ 0.34
CHD3-214ENST00000572579 TTLL9Q3SXZ7 439 aa17.19■□□□□ 0.34
CHD3-214ENST00000572579 C4orf17Q53FE4 359 aa17.19■□□□□ 0.34
CHD3-214ENST00000572579 FAAH2Q6GMR7 532 aa17.19■□□□□ 0.34
CHD3-214ENST00000572579 PAQR3Q6TCH7 311 aa17.19■□□□□ 0.34
CHD3-214ENST00000572579 KCNMB4Q86W47 210 aa17.19■□□□□ 0.34
CHD3-214ENST00000572579 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.19■□□□□ 0.34
CHD3-214ENST00000572579 TM9SF4Q92544 642 aa17.19■□□□□ 0.34
CHD3-214ENST00000572579 MMABQ96EY8 250 aaPredicted RBP17.19■□□□□ 0.34
CHD3-214ENST00000572579 TGIF2Q9GZN2 237 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms