RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 ATF6P18850 670 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 CYP2A7P20853 494 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 MZF1P28698 734 aaPredicted RBP10.43□□□□□ -0.74
CCDC40-207ENST00000572253 TGFBR2P37173 567 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 HNMTP50135 292 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 OLR1P78380 273 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 VEZF1Q14119 521 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 BOP1Q14137 746 aaKnown RBP10.43□□□□□ -0.74
CCDC40-207ENST00000572253 DEPDC1Q5TB30 811 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 GPR153Q6NV75 609 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 ZNF605Q86T29 641 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 CCDC103Q8IW40 242 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 SYTL1Q8IYJ3 562 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 DEPDC4Q8N2C3 294 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 HJURPQ8NCD3 748 aaPredicted RBP10.43□□□□□ -0.74
CCDC40-207ENST00000572253 TXNDC15Q96J42 360 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 COPS8Q99627 209 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 VPS51Q9UID3 782 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 PEX16Q9Y5Y5 336 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 EIF3FO00303 357 aaPredicted RBP10.43□□□□□ -0.74
CCDC40-207ENST00000572253 RFPL2O75678 378 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 COL6A1P12109 1028 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 BPIP17213 487 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 HOXA9P31269 272 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 SOX6P35712 828 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 LAIR1Q6GTX8 287 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 PNCKQ6P2M8 343 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 PCSK9Q8NBP7 692 aaKnown RBP10.43□□□□□ -0.74
CCDC40-207ENST00000572253 SPPL2AQ8TCT8 520 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 TRIB2Q92519 343 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 HRASLS5Q96KN8 279 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 C2orf49Q9BVC5 232 aaPredicted RBP10.43□□□□□ -0.74
CCDC40-207ENST00000572253 EBPLQ9BY08 206 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 ABCG8Q9H221 673 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 TMEM161AQ9NX61 479 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 DNMT3BQ9UBC3 853 aaKnown RBP10.43□□□□□ -0.74
CCDC40-207ENST00000572253 MAPRE3Q9UPY8 281 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 AP1M2Q9Y6Q5 423 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 CHD5Q8TDI0 1954 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 LOC100506127A0A0U1RQW1 187 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 MANSC4A6NHS7 340 aaPredicted RBP10.43□□□□□ -0.74
CCDC40-207ENST00000572253 ADAMDEC1O15204 470 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 PCDHGA12O60330 932 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 WBP4O75554 376 aaKnown RBP10.43□□□□□ -0.74
CCDC40-207ENST00000572253 OXSR1O95747 527 aaPredicted RBP10.43□□□□□ -0.74
CCDC40-207ENST00000572253 CD160O95971 181 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 B3GALT4O96024 378 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 AMD1P17707 334 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 FAM189BP81408 668 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 ACSM2AQ08AH3 577 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 MTAPQ13126 283 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 ATAD3BQ5T9A4 648 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 ACSM2BQ68CK6 577 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 C17orf99Q6UX52 265 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 GALNT10Q86SR1 603 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 ENTHD1Q8IYW4 607 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 EGLN2Q96KS0 407 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 CEP19Q96LK0 163 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 TTPALQ9BTX7 342 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 ZBTB20Q9HC78 741 aaPredicted RBP10.43□□□□□ -0.74
CCDC40-207ENST00000572253 IMPAD1Q9NX62 359 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 ZDHHC3Q9NYG2 299 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 PCDHB7Q9Y5E2 793 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 BPTFQ12830 3046 aa10.43□□□□□ -0.74
CCDC40-207ENST00000572253 GAPDHSO14556 408 aaPredicted RBP10.42□□□□□ -0.74
CCDC40-207ENST00000572253 NUAK1O60285 661 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 HOXB9P17482 250 aaPredicted RBP10.42□□□□□ -0.74
CCDC40-207ENST00000572253 GADD45AP24522 165 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 PTX3P26022 381 aaPredicted RBP10.42□□□□□ -0.74
CCDC40-207ENST00000572253 EPHA2P29317 976 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 PTPN5P54829 565 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 SLC14A1Q13336 389 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 BCL2A1Q16548 175 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 SPANXN2Q5MJ10 180 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 ZSWIM9Q86XI8 627 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 CBARPQ8N350 705 aaPredicted RBP10.42□□□□□ -0.74
CCDC40-207ENST00000572253 L3MBTL4Q8NA19 623 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 DCAF4L2Q8NA75 395 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 DNASE1L2Q92874 299 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 PYCR2Q96C36 320 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 KCNC2Q96PR1 638 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 ZNF556Q9HAH1 456 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 TPT1P8Q9HAU6 139 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 SPASTQ9UBP0 616 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 LRFN2Q9ULH4 789 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 RUVBL1Q9Y265 456 aaKnown RBP10.42□□□□□ -0.74
CCDC40-207ENST00000572253 TNFRSF11BO00300 401 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 PLK4O00444 970 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 DPM1O60762 260 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 LIPAP38571 399 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 IDH2P48735 452 aaKnown RBP10.42□□□□□ -0.74
CCDC40-207ENST00000572253 IRF8Q02556 426 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 FPGSQ05932 587 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 HSPA14Q0VDF9 509 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 SELENBP1Q13228 472 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 CHIT1Q13231 466 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 TRIM71Q2Q1W2 868 aaKnown RBP10.42□□□□□ -0.74
CCDC40-207ENST00000572253 PTCHD3Q3KNS1 767 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 COL21A1Q96P44 957 aa10.42□□□□□ -0.74
CCDC40-207ENST00000572253 GABARAPL3Q9BY60 117 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms