RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 MAGEB16A2A368 324 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 GSAPA4D1B5 854 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 GOLGA8OA6NCC3 632 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 ANKRD61A6NGH8 418 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 ANKRD30BLA7E2S9 258 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 A8MUI8 341 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 LACTBL1A8MY62 500 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 GOLGA8NF8WBI6 632 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 PRRG1O14668 218 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 ANKRD28O15084 1053 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 OR10H2O60403 315 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 STBD1O95210 358 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 TPM1P09493 284 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 IQCF3P0C7M6 154 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 UQCRFS1P1P0C7P4 283 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 RRASP10301 218 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 HAPLN1P10915 354 aaPredicted RBP3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 RALAP11233 206 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 ANXA8P13928 327 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 ENO3P13929 434 aaPredicted RBP3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 B4GALT1P15291 398 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 GNSP15586 552 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 EPCAMP16422 314 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 CDH3P22223 829 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 ITGA3P26006 1051 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 ARRB2P32121 409 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 PTGER4P35408 488 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 AVPR1AP37288 418 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 CETN2P41208 172 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 APOBEC1P41238 236 aaKnown RBP3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 CDX1P47902 265 aaPredicted RBP3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 COMPP49747 757 aaPredicted RBP3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 MMP15P51511 669 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 AIF1P55008 147 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 KCNK10P57789 538 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 IRX4P78413 519 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 HOXA4Q00056 320 aaPredicted RBP3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 ILF2Q12905 390 aaKnown RBP3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 BTG3Q14201 252 aaPredicted RBP3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 HADHQ16836 314 aaKnown RBP3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 CERKLQ49MI3 558 aaPredicted RBP3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 ANXA8L1Q5VT79 327 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 NCR3LG1Q68D85 454 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 FAM166AQ6J272 317 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 UGT3A1Q6NUS8 523 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 RGMBQ6NW40 437 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 KCTD18Q6PI47 426 aaPredicted RBP3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 ZNF517Q6ZMY9 492 aaPredicted RBP3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 Q6ZNX1 250 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 CHSY1Q86X52 802 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 EGFL6Q8IUX8 553 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 IQCF2Q8IXL9 164 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 ARHGAP24Q8N264 748 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 CERS5Q8N5B7 392 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 C1orf52Q8N6N3 182 aaKnown RBP3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 BCORP1Q8N888 145 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 STKLD1Q8NE28 680 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 OR2AK2Q8NG84 335 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 OR2T3Q8NH03 318 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 Q8TCH9 128 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 SLC44A1Q8WWI5 657 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 RAPGEF5Q92565 580 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 HAS2Q92819 552 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 SEMA4DQ92854 862 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 FUBP1Q96AE4 644 aaKnown RBP3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 MYEOVQ96EZ4 313 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 ZNF503Q96F45 646 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 TPD52L3Q96J77 140 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 ZNF333Q96JL9 665 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 MARK4Q96L34 752 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 PRICKLE1Q96MT3 831 aaPredicted RBP3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 ADOQ96SZ5 270 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 CMKLR1Q99788 373 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 KXD1Q9BQD3 176 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 EFHD1Q9BUP0 239 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 GPR61Q9BZJ8 451 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 FAM192AQ9GZU8 254 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 CLSTN2Q9H4D0 955 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 METTL7AQ9H8H3 244 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 MMP25Q9NPA2 562 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 TMEM51Q9NW97 253 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 MIOSQ9NXC5 875 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 FLRT1Q9NZU1 646 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 RCC2Q9P258 522 aaKnown RBP3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 PADI3Q9ULW8 664 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 TNNQ9UQP3 1299 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 ATG4BQ9Y4P1 393 aa3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 SPIN1Q9Y657 262 aaPredicted RBP3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 DDX49Q9Y6V7 483 aaKnown RBP3.16□□□□□ -1.9
HERPUD1-211ENST00000566550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.15□□□□□ -1.9
HERPUD1-211ENST00000566550 A0A1B0GUL7 405 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 MFSD2BA6NFX1 497 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 FAM90A26D6RGX4 464 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 E5RGE8 158 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 F8VVB4 439 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 F8VWA3 439 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 H0Y8G0 127 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 TMEM178BH3BS89 294 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 LGALS8O00214 317 aa3.15□□□□□ -1.91
HERPUD1-211ENST00000566550 BUB1O43683 1085 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms