RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 CNTNAP1P78357 1384 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 CEMIPQ8WUJ3 1361 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 ADAMTS7Q9UKP4 1686 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 RIC1Q4ADV7 1423 aa3.7□□□□□ -1.82
CHD9-212ENST00000564641 A0A1W2PN81 502 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 SYCE3A1L190 88 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 ELOVL7A1L3X0 281 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 NDUFS4O43181 175 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 CDC123O75794 336 aaPredicted RBP3.69□□□□□ -1.82
CHD9-212ENST00000564641 BBOX1O75936 387 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 ADCY5O95622 1261 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 TLX1P31314 330 aaPredicted RBP3.69□□□□□ -1.82
CHD9-212ENST00000564641 CHRNA7P36544 502 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 NNMTP40261 264 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 HADHAP40939 763 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 MAGEA11P43364 429 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 ROR1Q01973 937 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 PRKCZQ05513 592 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 NCBP1Q09161 790 aaKnown RBP3.69□□□□□ -1.82
CHD9-212ENST00000564641 PSMD6Q15008 389 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 P2RY6Q15077 328 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 SNAI3Q3KNW1 292 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 ALDH1L2Q3SY69 923 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 XKR6Q5GH73 641 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 GCNT6Q5T4J0 391 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 DOK6Q6PKX4 331 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 LINGO4Q6UY18 593 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 SMIM5Q71RC9 77 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 RPAINQ86UA6 219 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 MARVELD2Q8N4S9 558 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 WDTC1Q8N5D0 677 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 CCDC112Q8NEF3 446 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 HSD17B8Q92506 261 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 CALML4Q96GE6 196 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 C1orf74Q96LT6 269 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 WDFY2Q96P53 400 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 ZNF300Q96RE9 604 aaPredicted RBP3.69□□□□□ -1.82
CHD9-212ENST00000564641 PELI2Q9HAT8 420 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 MED4Q9NPJ6 270 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 SH3GLB2Q9NR46 395 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 GIMAP2Q9UG22 337 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 NENFQ9UMX5 172 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 CACNA1SQ13698 1873 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 KIF16BQ96L93 1317 aa3.69□□□□□ -1.82
CHD9-212ENST00000564641 BCORQ6W2J9 1755 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 FRMD3A2A2Y4 597 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 MYO1GB0I1T2 1018 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 H7C0S8 307 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 DNM1LO00429 736 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 ZNF197O14709 1029 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 PPIP5K2O43314 1243 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 KHDRBS3O75525 346 aaKnown RBP3.68□□□□□ -1.82
CHD9-212ENST00000564641 ERAL1O75616 437 aaKnown RBP3.68□□□□□ -1.82
CHD9-212ENST00000564641 OR2C1O95371 312 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 EFNA1P20827 205 aaPredicted RBP3.68□□□□□ -1.82
CHD9-212ENST00000564641 RPS12P25398 132 aaKnown RBP3.68□□□□□ -1.82
CHD9-212ENST00000564641 GARSP41250 739 aaKnown RBP3.68□□□□□ -1.82
CHD9-212ENST00000564641 PSMC4P43686 418 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 KRT83P78385 493 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 IFI35P80217 286 aaPredicted RBP3.68□□□□□ -1.82
CHD9-212ENST00000564641 TRDNQ13061 729 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 TPD52L1Q16890 204 aaPredicted RBP3.68□□□□□ -1.82
CHD9-212ENST00000564641 CRY2Q49AN0 593 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 RAB41Q5JT25 222 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 BSPRYQ5W0U4 402 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 NAA16Q6N069 864 aaPredicted RBP3.68□□□□□ -1.82
CHD9-212ENST00000564641 RPUSD3Q6P087 351 aaKnown RBP3.68□□□□□ -1.82
CHD9-212ENST00000564641 SYT10Q6XYQ8 523 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 TICAM1Q8IUC6 712 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 TAGAPQ8N103 731 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 C17orf53Q8N3J3 647 aaPredicted RBP3.68□□□□□ -1.82
CHD9-212ENST00000564641 DNAJC22Q8N4W6 341 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 RAB42Q8N4Z0 105 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 CCDC191Q8NCU4 936 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 KIAA1524Q8TCG1 905 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 KRT12Q99456 494 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 PKP2Q99959 881 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 UTP14AQ9BVJ6 771 aaKnown RBP3.68□□□□□ -1.82
CHD9-212ENST00000564641 LAT2Q9GZY6 243 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 ACKR4Q9NPB9 350 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 CHORDC1Q9UHD1 332 aaPredicted RBP3.68□□□□□ -1.82
CHD9-212ENST00000564641 RPS6KA6Q9UK32 745 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 ZNF215Q9UL58 517 aaPredicted RBP3.68□□□□□ -1.82
CHD9-212ENST00000564641 CORO1CQ9ULV4 474 aaPredicted RBP3.68□□□□□ -1.82
CHD9-212ENST00000564641 CSAG2Q9Y5P2 127 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 TRPM7Q96QT4 1865 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 LAMB4A4D0S4 1761 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 MAP3K15Q6ZN16 1313 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 RAD50Q92878 1312 aa3.68□□□□□ -1.82
CHD9-212ENST00000564641 SLX4Q8IY92 1834 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 PDE4DIPQ5VU43 2346 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 SMCHD1A6NHR9 2005 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 SIPA1L3O60292 1781 aaPredicted RBP3.67□□□□□ -1.82
CHD9-212ENST00000564641 A0A1W2PRB8 838 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 FAM170AA1A519 330 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 KPNA7A9QM74 516 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 SRSF10O75494 262 aaKnown RBP3.67□□□□□ -1.82
CHD9-212ENST00000564641 PRKRAO75569 313 aaKnown RBP3.67□□□□□ -1.82
CHD9-212ENST00000564641 MOCS3O95396 460 aa3.67□□□□□ -1.82
CHD9-212ENST00000564641 IVLP07476 585 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms