RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	PUM1	Q14671	1186 aa	Known RBP eCLIP	4.15	□□□□□ -1.75	3e-6	■□□□□ 9.2
MACF1-231	ENST00000564288	PAN3	Q58A45	887 aa	Known RBP	4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	FBXO42	Q6P3S6	717 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	DET1	Q7L5Y6	550 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	FBXL6	Q8N531	539 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	OR2T35	Q8NGX2	323 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	HSPA12B	Q96MM6	686 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	ZNF302	Q9NR11	478 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	ABCB8	Q9NUT2	735 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	PCDH17	O14917	1159 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	KCNA5	P22460	613 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	ADH6	P28332	368 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	HNF1B	P35680	557 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	DCST1	Q5T197	706 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	TRIM46	Q7Z4K8	759 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	PIAS4	Q8N2W9	510 aa	Predicted RBP	4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	SPATA22	Q8NHS9	363 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	CENPO	Q9BU64	300 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	ZNF358	Q9NW07	568 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288		A0A087WZ62	844 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	ALPL	P05186	524 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	HDC	P19113	662 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	PDHA2	P29803	388 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	TPRA1	Q86W33	373 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	AVL9	Q8NBF6	648 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	POMK	Q9H5K3	350 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	ALG9	Q9H6U8	611 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	SDHAF2	Q9NX18	166 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	ACAD8	Q9UKU7	415 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	ANKRD63	C9JTQ0	380 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	RETSAT	Q6NUM9	610 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	CHST15	Q7LFX5	561 aa	Predicted RBP	4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	FNDC11	Q9BVV2	318 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	ABCG5	Q9H222	651 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	OPA3	Q9H6K4	179 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	PPP1R14D	Q9NXH3	145 aa		4.15	□□□□□ -1.75
MACF1-231	ENST00000564288	ZNF98	A6NK75	572 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	PLAT	P00750	562 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	ATP5C1	P36542	298 aa	Known RBP	4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	CLCN7	P51798	805 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	ERVK-25	P63136	954 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	KCNA10	Q16322	511 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	HLF	Q16534	295 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	NTRK2	Q16620	822 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	TEX30	Q5JUR7	227 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	FBXL19	Q6PCT2	694 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	CATSPERG	Q6ZRH7	1159 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	SLC44A3	Q8N4M1	653 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	FBXO27	Q8NI29	283 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	FABP7	O15540	132 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	HBP1	O60381	514 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	CD2	P06729	351 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	INHBB	P09529	407 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	MCCD1	P59942	119 aa	Predicted RBP	4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	NKX3-2	P78367	333 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	AVPI1	Q5T686	147 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	MAMDC4	Q6UXC1	1216 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	PHYHIP	Q92561	330 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	PDGFD	Q9GZP0	370 aa	Predicted RBP	4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	POLE4	Q9NR33	117 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	DNAJC5B	Q9UF47	199 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	GMEB2	Q9UKD1	530 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	CRYBG1	Q9Y4K1	1723 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	PQLC2L	A1A4F0	135 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	PIAS1	O75925	651 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	ADRB1	P08588	477 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	MRPS10	P82664	201 aa	Known RBP	4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	MTM1	Q13496	603 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	LDHD	Q86WU2	507 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	PTGR2	Q8N8N7	351 aa	Predicted RBP	4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	MIOS	Q9NXC5	875 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	MARK1	Q9P0L2	795 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	CAMK2A	Q9UQM7	478 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	ERVK-19	Q9WJR5	959 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	ZBTB14	O43829	449 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	IDUA	P35475	653 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	PITPNB	P48739	271 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	TRMT10B	Q6PF06	316 aa	Known RBP	4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	PET117	Q6UWS5	81 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	ADGRG5	Q8IZF4	528 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	SLAIN1	Q8ND83	568 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	RAD9A	Q99638	391 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	MTG2	Q9H4K7	406 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	NLK	Q9UBE8	527 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	CLCA3P	Q9Y6N3	262 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	ASTN1	O14525	1302 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	MROH6	A6NGR9	719 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	CSH1	P0DML2	217 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	CSH2	P0DML3	217 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	HK1	P19367	917 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	GIPR	P48546	466 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	LRRN1	Q6UXK5	716 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	ADGRF3	Q8IZF5	1079 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	SLC25A36	Q96CQ1	311 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	MCMBP	Q9BTE3	642 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	MROH8	Q9H579	483 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	ZFP14	Q9HCL3	533 aa		4.14	□□□□□ -1.75
MACF1-231	ENST00000564288	DUS2	Q9NX74	493 aa	Known RBP	4.14	□□□□□ -1.75
MACF1-231	ENST00000564288		U3KQV3	271 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms