RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 ICMTO60725 284 aa17.14■□□□□ 0.33
GDE1-203ENST00000564172 HNRNPA2B1P22626 353 aaKnown RBP17.14■□□□□ 0.33
GDE1-203ENST00000564172 IFITM2Q01629 132 aa17.14■□□□□ 0.33
GDE1-203ENST00000564172 RPA4Q13156 261 aa17.14■□□□□ 0.33
GDE1-203ENST00000564172 ATP1A4Q13733 1029 aa17.14■□□□□ 0.33
GDE1-203ENST00000564172 PTK2BQ14289 1009 aa17.14■□□□□ 0.33
GDE1-203ENST00000564172 TBCCQ15814 346 aa17.14■□□□□ 0.33
GDE1-203ENST00000564172 AGAP7PQ5VUJ5 663 aa17.14■□□□□ 0.33
GDE1-203ENST00000564172 GPRIN3Q6ZVF9 776 aa17.14■□□□□ 0.33
GDE1-203ENST00000564172 TOE1Q96GM8 510 aaKnown RBP17.14■□□□□ 0.33
GDE1-203ENST00000564172 BMFQ96LC9 184 aa17.14■□□□□ 0.33
GDE1-203ENST00000564172 OR52A5Q9H2C5 316 aa17.14■□□□□ 0.33
GDE1-203ENST00000564172 ANKMY1Q9P2S6 941 aa17.14■□□□□ 0.33
GDE1-203ENST00000564172 CA5BQ9Y2D0 317 aa17.14■□□□□ 0.33
GDE1-203ENST00000564172 FPGTO14772 594 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 OR4F21O95013 312 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 C1orf105O95561 183 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 HOXC4P09017 264 aaPredicted RBP17.13■□□□□ 0.33
GDE1-203ENST00000564172 NAGAP17050 411 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 ACADLP28330 430 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 PKNOX1P55347 436 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 ERVPABLB-1P60509 514 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 CD300CQ08708 224 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 OXA1LQ15070 435 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 TRIP10Q15642 601 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 CCSMST1Q4G0I0 132 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 SLX4IPQ5VYV7 408 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 METRNLQ641Q3 311 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 OGFOD2Q6N063 350 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 GPR180Q86V85 440 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 DCBLD1Q8N8Z6 715 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 TBC1D15Q8TC07 691 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 ATP6V1E2Q96A05 226 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 THAP11Q96EK4 314 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 CDK15Q96Q40 435 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 MROQ9BYG7 248 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 SLC32A1Q9H598 525 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 C6orf106Q9H6K1 298 aaPredicted RBP17.13■□□□□ 0.33
GDE1-203ENST00000564172 H0Y8X5 98 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 M0QX08 132 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 ALX3O95076 343 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 STAMBPO95630 424 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 NCF2P19878 526 aaPredicted RBP17.13■□□□□ 0.33
GDE1-203ENST00000564172 BDKRB1P46663 353 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 SLC6A12P48065 614 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 CYP2A13Q16696 494 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 LRRC36Q1X8D7 754 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 TRIM16LQ309B1 348 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 PTCHD3Q3KNS1 767 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 PPP4R4Q6NUP7 873 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 LETMD1Q6P1Q0 360 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 CHST15Q7LFX5 561 aaPredicted RBP17.13■□□□□ 0.33
GDE1-203ENST00000564172 DCP2Q8IU60 420 aaKnown RBP17.13■□□□□ 0.33
GDE1-203ENST00000564172 UBALD2Q8IYN6 164 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 SLC38A6Q8IZM9 456 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 TRIML2Q8N7C3 387 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 RBM15BQ8NDT2 890 aaKnown RBP17.13■□□□□ 0.33
GDE1-203ENST00000564172 TWIST2Q8WVJ9 160 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 FBXL8Q96CD0 374 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 CCDC106Q9BWC9 280 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 TBC1D17Q9HA65 648 aa17.13■□□□□ 0.33
GDE1-203ENST00000564172 MRPL40Q9NQ50 206 aaKnown RBP17.13■□□□□ 0.33
GDE1-203ENST00000564172 WSB2Q9NYS7 404 aaPredicted RBP17.13■□□□□ 0.33
GDE1-203ENST00000564172 ARHGAP33O14559 1287 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 SCO2O43819 266 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 CRCPO75575 148 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 OTCP00480 354 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 UROSP10746 265 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 EPB42P16452 691 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 TRAF3Q13114 568 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 UBAP2LQ14157 1087 aaKnown RBP17.12■□□□□ 0.33
GDE1-203ENST00000564172 FBXO15Q8NCQ5 510 aaPredicted RBP17.12■□□□□ 0.33
GDE1-203ENST00000564172 TNIP2Q8NFZ5 429 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 TSPAN14Q8NG11 270 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 OR4F6Q8NGB9 312 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 ADAMTS16Q8TE57 1224 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 PYCR2Q96C36 320 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 ZDHHC5Q9C0B5 715 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 TUBB1Q9H4B7 451 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 CAPN14A8MX76 684 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 TMCC2O75069 709 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 IGHV4-34P06331 123 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 OXTRP30559 389 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 ARL1P40616 181 aaPredicted RBP17.12■□□□□ 0.33
GDE1-203ENST00000564172 IST1P53990 364 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 KIAA1024LP59773 190 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 PYCR3Q53H96 274 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 LRRC70Q7Z2Q7 622 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 CLVS1Q8IUQ0 354 aaPredicted RBP17.12■□□□□ 0.33
GDE1-203ENST00000564172 NATD1Q8N6N6 113 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 FRMD1Q8N878 549 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 CDYL2Q8N8U2 506 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 C19orf60Q96EN9 201 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 SCARF2Q96GP6 870 aaPredicted RBP17.12■□□□□ 0.33
GDE1-203ENST00000564172 C3orf30Q96M34 536 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 PKP4Q99569 1192 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 THTPAQ9BU02 230 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 TPSD1Q9BZJ3 242 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 ATG10Q9H0Y0 220 aa17.12■□□□□ 0.33
GDE1-203ENST00000564172 LIN28AQ9H9Z2 209 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms