RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 OR2A1Q8NGT9 310 aa18.18■□□□□ 0.5
SYNGR3-203ENST00000563869 SEC16BQ96JE7 1060 aa18.18■□□□□ 0.5
SYNGR3-203ENST00000563869 SLC41A2Q96JW4 573 aa18.18■□□□□ 0.5
SYNGR3-203ENST00000563869 FCRL4Q96PJ5 515 aa18.18■□□□□ 0.5
SYNGR3-203ENST00000563869 CD244Q9BZW8 370 aa18.18■□□□□ 0.5
SYNGR3-203ENST00000563869 EHD1Q9H4M9 534 aa18.18■□□□□ 0.5
SYNGR3-203ENST00000563869 TMEM184CQ9NVA4 438 aa18.18■□□□□ 0.5
SYNGR3-203ENST00000563869 OPTCQ9UBM4 332 aa18.18■□□□□ 0.5
SYNGR3-203ENST00000563869 ANGPTL3Q9Y5C1 460 aa18.18■□□□□ 0.5
SYNGR3-203ENST00000563869 PCDHGA7Q9Y5G6 932 aa18.18■□□□□ 0.5
SYNGR3-203ENST00000563869 B4E171 279 aa18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 TXNDC9O14530 226 aa18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 CLGNO14967 610 aa18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 CASC3O15234 703 aaKnown RBP18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 MYL2P10916 166 aa18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 EZRP15311 586 aaKnown RBP18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 EPB42P16452 691 aa18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 HPDP32754 393 aaPredicted RBP18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 TSPAN7P41732 249 aa18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 SLC6A12P48065 614 aa18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 PGGT1BP53609 377 aa18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 PCBP2Q15366 365 aaKnown RBP eCLIP18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 PTCHD3Q3KNS1 767 aa18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 LINC00303Q3SY05 128 aa18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 LRRC56Q8IYG6 542 aaPredicted RBP18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 C19orf47Q8N9M1 422 aaKnown RBP18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 CCDC63Q8NA47 563 aa18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 N4BP2L2Q92802 583 aaPredicted RBP18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 THAP11Q96EK4 314 aa18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 IL17FQ96PD4 163 aa18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 MAP3K3Q99759 626 aa18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 ASPSCR1Q9BZE9 553 aa18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 ATG10Q9H0Y0 220 aa18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 TMBIM4Q9HC24 238 aa18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 DNAJC11Q9NVH1 559 aa18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 SOHLH2Q9NX45 425 aa18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 CPSF2Q9P2I0 782 aaKnown RBP18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 TAC3Q9UHF0 121 aa18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 PLLPQ9Y342 182 aa18.17■□□□□ 0.5
SYNGR3-203ENST00000563869 SPTA1P02549 2419 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 NCF1BA6NI72 391 aaPredicted RBP18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 NCF1CA8MVU1 366 aaPredicted RBP18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 HMGB1P1B2RPK0 211 aaPredicted RBP18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 K7EPI3 171 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 UBXN8O00124 270 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 DYNC1I1O14576 645 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 PLD2O14939 933 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 PRPF4O43172 522 aaKnown RBP eCLIP18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 UGDHO60701 494 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 H2AFYO75367 372 aaKnown RBP18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 WDR47O94967 919 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 JMJD7P0C870 316 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 NCF1P14598 390 aaPredicted RBP18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 GFERP55789 205 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 CDC16Q13042 620 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 LAPTM5Q13571 262 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 PDK4Q16654 411 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 PFKFB4Q16877 469 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 PAGE2BQ5JRK9 111 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 C10orf62Q5T681 223 aaPredicted RBP18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 RAB11FIP2Q7L804 512 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 THOC6Q86W42 341 aaKnown RBP18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 C4orf33Q8N1A6 199 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 D2HGDHQ8N465 521 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 ZNF655Q8N720 491 aaPredicted RBP18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 JPH3Q8WXH2 748 aaPredicted RBP18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 EXT2Q93063 718 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 UBE2E3Q969T4 207 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 C1QTNF3Q9BXJ4 246 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 PELI2Q9HAT8 420 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 FBXO8Q9NRD0 319 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 SPHK1Q9NYA1 384 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 TMEM216Q9P0N5 145 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 ACSL6Q9UKU0 697 aa18.16■□□□□ 0.5
SYNGR3-203ENST00000563869 A0A1W2PPV9 198 aa18.15■□□□□ 0.5
SYNGR3-203ENST00000563869 TERTO14746 1132 aaKnown RBP18.15■□□□□ 0.5
SYNGR3-203ENST00000563869 SRPX2O60687 465 aaPredicted RBP18.15■□□□□ 0.5
SYNGR3-203ENST00000563869 SNUPNO95149 360 aaKnown RBP18.15■□□□□ 0.5
SYNGR3-203ENST00000563869 ITGB2P05107 769 aa18.15■□□□□ 0.5
SYNGR3-203ENST00000563869 MTHFD2P13995 350 aa18.15■□□□□ 0.5
SYNGR3-203ENST00000563869 SLC5A2P31639 672 aa18.15■□□□□ 0.5
SYNGR3-203ENST00000563869 CCR8P51685 355 aa18.15■□□□□ 0.5
SYNGR3-203ENST00000563869 PCDH1Q08174 1060 aa18.15■□□□□ 0.5
SYNGR3-203ENST00000563869 HSP90B2PQ58FF3 399 aa18.15■□□□□ 0.5
SYNGR3-203ENST00000563869 TCTE1Q5JU00 501 aa18.15■□□□□ 0.5
SYNGR3-203ENST00000563869 SNAP47Q5SQN1 464 aa18.15■□□□□ 0.5
SYNGR3-203ENST00000563869 SUSD1Q6UWL2 747 aa18.15■□□□□ 0.5
SYNGR3-203ENST00000563869 ZNF574Q6ZN55 896 aaPredicted RBP18.15■□□□□ 0.5
SYNGR3-203ENST00000563869 KRT78Q8N1N4 520 aa18.15■□□□□ 0.5
SYNGR3-203ENST00000563869 ABHD11Q8NFV4 315 aa18.15■□□□□ 0.5
SYNGR3-203ENST00000563869 TTLQ8NG68 377 aa18.15■□□□□ 0.5
SYNGR3-203ENST00000563869 TRAPPC9Q96Q05 1148 aa18.15■□□□□ 0.5
SYNGR3-203ENST00000563869 AIF1LQ9BQI0 150 aa18.15■□□□□ 0.5
SYNGR3-203ENST00000563869 NLNQ9BYT8 704 aa18.15■□□□□ 0.5
SYNGR3-203ENST00000563869 TRIM4Q9C037 500 aa18.15■□□□□ 0.5
SYNGR3-203ENST00000563869 STARD5Q9NSY2 213 aa18.15■□□□□ 0.5
SYNGR3-203ENST00000563869 KLHL3Q9UH77 587 aa18.15■□□□□ 0.5
SYNGR3-203ENST00000563869 IKZF3Q9UKT9 509 aa18.15■□□□□ 0.5
SYNGR3-203ENST00000563869 PLIN3O60664 434 aa18.14■□□□□ 0.49
SYNGR3-203ENST00000563869 CPA3P15088 417 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms