RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 MGLLQ99685 303 aa6.11□□□□□ -1.43
CLK3-212ENST00000563418 TBC1D17Q9HA65 648 aa6.11□□□□□ -1.43
CLK3-212ENST00000563418 TLR8Q9NR97 1041 aaKnown RBP6.11□□□□□ -1.43
CLK3-212ENST00000563418 MYEF2Q9P2K5 600 aaKnown RBP6.11□□□□□ -1.43
CLK3-212ENST00000563418 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.11□□□□□ -1.43
CLK3-212ENST00000563418 FMN2Q9NZ56 1722 aa6.11□□□□□ -1.43
CLK3-212ENST00000563418 TCRBV5S4A2TA0A5A2 114 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 ZNF98A6NK75 572 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 HAAOP46952 286 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 ACSM2AQ08AH3 577 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 SEMA3BQ13214 749 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 CAMK2GQ13555 558 aaPredicted RBP6.1□□□□□ -1.43
CLK3-212ENST00000563418 SEMA5AQ13591 1074 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 LRRC26Q2I0M4 334 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 ACSM2BQ68CK6 577 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 GRHL2Q6ISB3 625 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 TMEM185AQ8NFB2 350 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 TMEM185BQ9H7F4 350 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 TAS2R8Q9NYW2 309 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 MARK1Q9P0L2 795 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 SAE1Q9UBE0 346 aaPredicted RBP6.1□□□□□ -1.43
CLK3-212ENST00000563418 KLK4Q9Y5K2 254 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 ARGFXA6NJG6 315 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 F5H0A9 414 aaPredicted RBP6.1□□□□□ -1.43
CLK3-212ENST00000563418 PSMD9O00233 223 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 FARS2O95363 451 aaKnown RBP6.1□□□□□ -1.43
CLK3-212ENST00000563418 F10P00742 488 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 TGM1P22735 817 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 EEF1A1P68104 462 aaKnown RBP6.1□□□□□ -1.43
CLK3-212ENST00000563418 EEF1A2Q05639 463 aaKnown RBP6.1□□□□□ -1.43
CLK3-212ENST00000563418 PPP3CAQ08209 521 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 TRAM2Q15035 370 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 IFI44LQ53G44 452 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 SYT6Q5T7P8 510 aaPredicted RBP6.1□□□□□ -1.43
CLK3-212ENST00000563418 RC3H1Q5TC82 1133 aaKnown RBP6.1□□□□□ -1.43
CLK3-212ENST00000563418 EEF1A1P5Q5VTE0 462 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 ACOT11Q8WXI4 607 aaPredicted RBP6.1□□□□□ -1.43
CLK3-212ENST00000563418 ELP4Q96EB1 424 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 CACNG6Q9BXT2 260 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 SAP130Q9H0E3 1048 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 THUMPD1Q9NXG2 353 aaKnown RBP6.1□□□□□ -1.43
CLK3-212ENST00000563418 RAB3DO95716 219 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 DGKAP23743 735 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 ZER1Q7Z7L7 766 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 CAMKVQ8NCB2 501 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 OR10G2Q8NGC3 310 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 FCAMRQ8WWV6 532 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 TRIB2Q92519 343 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 CDC6Q99741 560 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 TAS2R10Q9NYW0 307 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 EXTL2Q9UBQ6 330 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 SEC14L3Q9UDX4 400 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 VWA7Q9Y334 891 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 DNAJB6O75190 326 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 TPT1P13693 172 aaKnown RBP6.1□□□□□ -1.43
CLK3-212ENST00000563418 FSHRP23945 695 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 PRSS55Q6UWB4 352 aaPredicted RBP6.1□□□□□ -1.43
CLK3-212ENST00000563418 HIST2H3AQ71DI3 136 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 SPRED1Q7Z699 444 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 ADAMTS19Q8TE59 1207 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 MRPS31Q92665 395 aaKnown RBP6.1□□□□□ -1.43
CLK3-212ENST00000563418 S100A16Q96FQ6 103 aaKnown RBP6.1□□□□□ -1.43
CLK3-212ENST00000563418 OMDQ99983 421 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 CTPS2Q9NRF8 586 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 CHRAC1Q9NRG0 131 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 ACAD8Q9UKU7 415 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 TMPRSS11EQ9UL52 423 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 PCDHGA7Q9Y5G6 932 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 FAM170BA6NMN3 283 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 NEDD8-MDP1E9PL57 170 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 CYP2A6P11509 494 aaPredicted RBP6.1□□□□□ -1.43
CLK3-212ENST00000563418 ARSBP15848 533 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 KCNA6P17658 529 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 TTPAP49638 278 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 CYCSP99999 105 aaKnown RBP6.1□□□□□ -1.43
CLK3-212ENST00000563418 E2F1Q01094 437 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 KCTD2Q14681 263 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 CYBRD1Q53TN4 286 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 PPM1JQ5JR12 505 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 LURAP1LQ8IV03 231 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 TMEM102Q8N9M5 508 aaPredicted RBP6.1□□□□□ -1.43
CLK3-212ENST00000563418 PTCHD1Q96NR3 888 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 PAPOLGQ9BWT3 736 aaKnown RBP6.1□□□□□ -1.43
CLK3-212ENST00000563418 ATRNL1Q5VV63 1379 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 TGOLN2O43493 480 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 ADAP00813 363 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 LTFP02788 710 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 HOXD8P13378 290 aaPredicted RBP6.1□□□□□ -1.43
CLK3-212ENST00000563418 CD1EP15812 388 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 DSG3P32926 999 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 EMX1Q04741 257 aaPredicted RBP6.1□□□□□ -1.43
CLK3-212ENST00000563418 FAM189A2Q15884 450 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 KIAA1161Q6NSJ0 714 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 NT5DC4Q86YG4 428 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 ZC3H3Q8IXZ2 948 aaKnown RBP6.1□□□□□ -1.43
CLK3-212ENST00000563418 OR10R2Q8NGX6 335 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 OR56B4Q8NH76 319 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 ELP5Q8TE02 316 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 UBE2E3Q969T4 207 aa6.1□□□□□ -1.43
CLK3-212ENST00000563418 MRI1Q9BV20 369 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms