RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 DIRC2Q96SL1 478 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 NDNQ99608 321 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 NPAS2Q99743 824 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 BDH2Q9BUT1 245 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 ANGPTL4Q9BY76 406 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 GOLPH3Q9H4A6 298 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 MRPS30Q9NP92 439 aaKnown RBP4.62□□□□□ -1.67
SMG1-207ENST00000563235 DIABLOQ9NR28 239 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 ALKBH4Q9NXW9 302 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 HCN3Q9P1Z3 774 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 CDH22Q9UJ99 828 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 C3orf18Q9UK00 162 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 ADGRL2O95490 1459 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 MAP3K15Q6ZN16 1313 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 CDHR2Q9BYE9 1310 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 A0A087WWL8 130 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.62□□□□□ -1.67
SMG1-207ENST00000563235 SAC3D1A6NKF1 404 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 PI15O43692 258 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 ADAP1O75689 374 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 CXCL10P02778 98 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 ICAM1P05362 532 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 SRPRAP08240 638 aaKnown RBP4.62□□□□□ -1.67
SMG1-207ENST00000563235 SLC2A3P11169 496 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 CCNB1P14635 433 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 PRPS1L1P21108 318 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 ACVR2AP27037 513 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 OR1E1P30953 314 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 IFNA8P32881 189 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 CD68P34810 354 aaPredicted RBP4.62□□□□□ -1.67
SMG1-207ENST00000563235 CNN1P51911 297 aaKnown RBP4.62□□□□□ -1.67
SMG1-207ENST00000563235 F2RL1P55085 397 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 NRG3P56975 720 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 NUP107P57740 925 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 EFNB1P98172 346 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 CD69Q07108 199 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 SPOCK1Q08629 439 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 PKP1Q13835 747 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 TMEM211Q6ICI0 200 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 VSTM1Q6UX27 236 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 LIPIQ6XZB0 460 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 HSDL2Q6YN16 418 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 CFAP77Q6ZQR2 320 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 TBC1D10CQ8IV04 446 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 FUKQ8N0W3 1084 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 RNF148Q8N7C7 305 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 COLGALT1Q8NBJ5 622 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 PDZD8Q8NEN9 1154 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 DDX54Q8TDD1 881 aaKnown RBP4.62□□□□□ -1.67
SMG1-207ENST00000563235 MAP4K1Q92918 833 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 CIDECQ96AQ7 238 aaPredicted RBP4.62□□□□□ -1.67
SMG1-207ENST00000563235 NXNL1Q96CM4 212 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 DGCR14Q96DF8 476 aaKnown RBP4.62□□□□□ -1.67
SMG1-207ENST00000563235 SPATA33Q96N06 139 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 TOX2Q96NM4 488 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 TEFMQ96QE5 360 aaKnown RBP4.62□□□□□ -1.67
SMG1-207ENST00000563235 ZNF559Q9BR84 538 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 NAT9Q9BTE0 207 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 SGPP1Q9BX95 441 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 STRADBQ9C0K7 418 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 RAB1BQ9H0U4 201 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 SMOC2Q9H3U7 446 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 LMAN1LQ9HAT1 526 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 RAB18Q9NP72 206 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 PPANQ9NQ55 473 aaKnown RBP4.62□□□□□ -1.67
SMG1-207ENST00000563235 TNFRSF18Q9Y5U5 241 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 MAST3O60307 1309 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 COL24A1Q17RW2 1714 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 THSD7AQ9UPZ6 1657 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 A0A087WV48 116 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 A0A0B4J293 547 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 A0A1B0GVG6 124 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 A0A1W2PNR3 127 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 MBD3L4A6NDZ8 208 aaPredicted RBP4.61□□□□□ -1.67
SMG1-207ENST00000563235 MBD3L3A6NE82 208 aaPredicted RBP4.61□□□□□ -1.67
SMG1-207ENST00000563235 ZBTB42B2RXF5 422 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 C1QTNF3-AMACRE9PGA6 284 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 AURKAO14965 403 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 CHUKO15111 745 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 HCN1O60741 890 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 PFKFB2O60825 505 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 SHOX2O60902 331 aaPredicted RBP4.61□□□□□ -1.67
SMG1-207ENST00000563235 OXSR1O95747 527 aaPredicted RBP4.61□□□□□ -1.67
SMG1-207ENST00000563235 RPLP2P05387 115 aaKnown RBP4.61□□□□□ -1.67
SMG1-207ENST00000563235 ITGB5P18084 799 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 GNAZP19086 355 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 TPSB2P20231 275 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 EDN2P20800 178 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 TGM2P21980 687 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 PTGS1P23219 599 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 SLC6A2P23975 617 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 PON1P27169 355 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 NAA10P41227 235 aaPredicted RBP4.61□□□□□ -1.67
SMG1-207ENST00000563235 CD97P48960 835 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 SPCS3P61009 180 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 CSNK2A1P68400 391 aaPredicted RBP4.61□□□□□ -1.67
SMG1-207ENST00000563235 RBPJQ06330 500 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 FUT7Q11130 342 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 HEPACAMQ14CZ8 416 aa4.61□□□□□ -1.67
SMG1-207ENST00000563235 TPSAB1Q15661 275 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms