RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 TBL3Q12788 808 aaKnown RBP6.31□□□□□ -1.4
CAPN3-210ENST00000561817 STX5Q13190 355 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 CHIT1Q13231 466 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 SGCGQ13326 291 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 CCNIQ14094 377 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 DOC2AQ14183 400 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 UBXN2BQ14CS0 331 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 MAPRE2Q15555 327 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 MLF2Q15773 248 aaPredicted RBP6.31□□□□□ -1.4
CAPN3-210ENST00000561817 SNCBQ16143 134 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 CYP2A13Q16696 494 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 AP5B1Q2VPB7 878 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 TRMT5Q32P41 509 aaKnown RBP6.31□□□□□ -1.4
CAPN3-210ENST00000561817 ATP6AP1LQ52LC2 224 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 LIPJQ5W064 366 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 FRG2Q64ET8 278 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 GRHL2Q6ISB3 625 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 CYP20A1Q6UW02 462 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 SUSD1Q6UWL2 747 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 C16orf89Q6UX73 402 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 GCNT7Q6ZNI0 430 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 HPS6Q86YV9 775 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 GALNT13Q8IUC8 556 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 ARHGAP24Q8N264 748 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 FBXW8Q8N3Y1 598 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 LMNTD1Q8N9Z9 388 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 TMEM145Q8NBT3 493 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 PPFIBP2Q8ND30 876 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 LSM14AQ8ND56 463 aaKnown RBP6.31□□□□□ -1.4
CAPN3-210ENST00000561817 PHC3Q8NDX5 983 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 PJA1Q8NG27 643 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 OR5AR1Q8NGP9 310 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 OR2T34Q8NGX1 318 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 GANCQ8TET4 914 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 NUDT8Q8WV74 236 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 ATP6V1E2Q96A05 226 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 MCUR1Q96AQ8 359 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 ANAPC16Q96DE5 110 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 MAGEB10Q96LZ2 347 aaPredicted RBP6.31□□□□□ -1.4
CAPN3-210ENST00000561817 PPP3R2Q96LZ3 170 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 FOPNLQ96NB1 174 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 FRG2BQ96QU4 278 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 NRTNQ99748 197 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 ORAI3Q9BRQ5 295 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 C1orf50Q9BV19 199 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 SARGQ9BW04 601 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 ACTR8Q9H981 624 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 WDR41Q9HAD4 459 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 RNPEPL1Q9HAU8 725 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 FGF22Q9HCT0 170 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 FZD3Q9NPG1 666 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 PFDN4Q9NQP4 134 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 SPATA6Q9NWH7 488 aaPredicted RBP6.31□□□□□ -1.4
CAPN3-210ENST00000561817 GPRC5BQ9NZH0 403 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 NOP53Q9NZM5 478 aaKnown RBP6.31□□□□□ -1.4
CAPN3-210ENST00000561817 CCDC167Q9P0B6 97 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 TMEM181Q9P2C4 612 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 KLQ9UEF7 1012 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 CD300AQ9UGN4 299 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 CIDEBQ9UHD4 219 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 BAIAP2L1Q9UHR4 511 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 ZNHIT2Q9UHR6 403 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 ZNF490Q9ULM2 529 aaPredicted RBP6.31□□□□□ -1.4
CAPN3-210ENST00000561817 PNMA8BQ9ULN7 279 aaPredicted RBP6.31□□□□□ -1.4
CAPN3-210ENST00000561817 POMPQ9Y244 141 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 WDR37Q9Y2I8 494 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 NEUROG3Q9Y4Z2 214 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 TRIOO75962 3097 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 LRP4O75096 1905 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 PCM1Q15154 2024 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 TBC1D3DA0A087WVF3 549 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 TBC1D3IA0A087WXS9 549 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 TBC1D3EA0A087X179 549 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 TBC1D3KA0A087X1G2 549 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 A0A1W2PP18 115 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 A0A1W2PPV9 198 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 PABPN1LA6NDY0 278 aaKnown RBP6.3□□□□□ -1.4
CAPN3-210ENST00000561817 TBC1D3FA6NER0 549 aaPredicted RBP6.3□□□□□ -1.4
CAPN3-210ENST00000561817 PRR23AA6NEV1 266 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 TBC1D3LB9A6J9 549 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 NR5A2O00482 541 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 MAN2B1O00754 1011 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 ACOT8O14734 319 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 MRASO14807 208 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 SLC31A1O15431 190 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 RGS14O43566 566 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 KCNJ13O60928 360 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 EEDO75530 441 aaKnown RBP6.3□□□□□ -1.4
CAPN3-210ENST00000561817 SLC22A3O75751 556 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 KRT36O76013 467 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 PDE5AO76074 875 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 KLHL18O94889 574 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 PSMG1O95456 288 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 PDGFBP01127 241 aaPredicted RBP6.3□□□□□ -1.4
CAPN3-210ENST00000561817 KRT6AP02538 564 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 KRT6BP04259 564 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 IGHV4-34P06331 123 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 TBC1D3HP0C7X1 549 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 BCKDHAP12694 445 aa6.3□□□□□ -1.4
CAPN3-210ENST00000561817 XRCC1P18887 633 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms