RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 NR1D1P20393 614 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 MAGP20916 626 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 MPSTP25325 297 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 MAPK1P28482 360 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 CMPK1P30085 196 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 ARRB2P32121 409 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 CCKBRP32239 447 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 GRIA3P42263 894 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 PPP2R2AP63151 447 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 SIM1P81133 766 aaPredicted RBP6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 PRDX1Q06830 199 aaKnown RBP6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 ZFP36L1Q07352 338 aaKnown RBP6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 TRAF3Q13114 568 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 TSTA3Q13630 321 aaPredicted RBP6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 GTF2H2Q13888 395 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 E2F2Q14209 437 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 ZIC1Q15915 447 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 PDK4Q16654 411 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 UNC50Q53HI1 259 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 HES3Q5TGS1 186 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 FAM219BQ5XKK7 198 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 FCRL6Q6DN72 434 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 ARMC6Q6NXE6 501 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 GTF2H2CQ6P1K8 395 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 TMEM71Q6P5X7 295 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 ATG14Q6ZNE5 492 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 RBM44Q6ZP01 1051 aaKnown RBP6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 ZCCHC23Q6ZST2 131 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 FRMD7Q6ZUT3 714 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 USP53Q70EK8 1073 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 TMPRSS11BQ86T26 416 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 PAQR7Q86WK9 346 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 KRTAP1-3Q8IUG1 177 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 PLXDC1Q8IUK5 500 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 SLC22A9Q8IVM8 553 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 CARFQ8N187 725 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 C19orf47Q8N9M1 422 aaKnown RBP6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 OR52B6Q8NGF0 335 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 MGARPQ8TDB4 240 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 SLC5A11Q8WWX8 675 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 NEIL2Q969S2 332 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 SLC22A18Q96BI1 424 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 CCDC126Q96EE4 140 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 PRR11Q96HE9 360 aaPredicted RBP6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 PSMG3-AS1Q96PY0 264 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 TRAPPC9Q96Q05 1148 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 MAP3K3Q99759 626 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 DPYSL5Q9BPU6 564 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 HAUS8Q9BT25 410 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 GATA5Q9BWX5 397 aaPredicted RBP6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 PCBD2Q9H0N5 130 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 ZNF768Q9H5H4 540 aaKnown RBP6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 SYNPO2LQ9H987 977 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 C1GALT1Q9NS00 363 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 ABCF3Q9NUQ8 709 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 DNAJC11Q9NVH1 559 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 SIDT1Q9NXL6 827 aaKnown RBP6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 GPRC5BQ9NZH0 403 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 ANKMY1Q9P2S6 941 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 OPTCQ9UBM4 332 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 KLHL3Q9UH77 587 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 KLHL20Q9Y2M5 609 aa6.76□□□□□ -1.33
CTDSPL2-210ENST00000560834 HEATR5BQ9P2D3 2071 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 GOLGA4Q13439 2230 aaKnown RBP6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 KCNE1BA0A087WTH5 132 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 DCDC2BA2VCK2 349 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 PPP6CO00743 305 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 UBFD1O14562 309 aaKnown RBP6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 HAT1O14929 419 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 BIRC5O15392 142 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 TOX3O15405 576 aaPredicted RBP6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 HCRTR1O43613 425 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 HYAL3O43820 417 aaPredicted RBP6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 PRAMEF10O60809 474 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 TRIM13O60858 407 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 IL2RAP01589 272 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 CHN1P15882 459 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 TSPAN8P19075 237 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 IMPDH1P20839 514 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 CDH3P22223 829 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 CCR10P46092 362 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 GABRA4P48169 554 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 PPM1FP49593 454 aaPredicted RBP6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 NAGLUP54802 743 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 CDH13P55290 713 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 CSNK1G2P78368 415 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 ABATP80404 500 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 REEP5Q00765 189 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 E2F1Q01094 437 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 PCDH1Q08174 1060 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 C16orf72Q14CZ0 275 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 SF1Q15637 639 aaKnown RBP6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 CCDC157Q569K6 752 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 HSP90B2PQ58FF3 399 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 SNAP47Q5SQN1 464 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 CATSPEREQ5SY80 951 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 THEMIS2Q5TEJ8 643 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 CACHD1Q5VU97 1274 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 ATG9BQ674R7 924 aa6.75□□□□□ -1.33
CTDSPL2-210ENST00000560834 LETMD1Q6P1Q0 360 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms