RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 OBP2AQ9NY56 170 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 TMEM9Q9P0T7 183 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 GPR34Q9UPC5 381 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 MRPS23Q9Y3D9 190 aaKnown RBP7.83□□□□□ -1.16
SMAD3-212ENST00000559937 KCNE2Q9Y6J6 123 aa7.83□□□□□ -1.16
SMAD3-212ENST00000559937 EME2A4GXA9 379 aaPredicted RBP7.82□□□□□ -1.16
SMAD3-212ENST00000559937 LINC01553A4QN01 128 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 MAGEB17A8MXT2 336 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 E7EQ34 232 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 H3BSA7 217 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 CLIC1O00299 241 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 FOXE1O00358 373 aaPredicted RBP7.82□□□□□ -1.16
SMAD3-212ENST00000559937 KPNA3O00505 521 aaPredicted RBP7.82□□□□□ -1.16
SMAD3-212ENST00000559937 GNGT2O14610 69 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 SCAMP2O15127 329 aaKnown RBP7.82□□□□□ -1.16
SMAD3-212ENST00000559937 LILRB5O75023 590 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 MTX2O75431 263 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 TRMUO75648 421 aaKnown RBP7.82□□□□□ -1.16
SMAD3-212ENST00000559937 C1orf105O95561 183 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 CPNE6O95741 557 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 MT-ND1P03886 318 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 ABCB1P08183 1280 aaPredicted RBP7.82□□□□□ -1.16
SMAD3-212ENST00000559937 ITGAMP11215 1152 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 ETS2P15036 469 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 TIA1P31483 386 aaKnown RBP eCLIP7.82□□□□□ -1.16
SMAD3-212ENST00000559937 HPCAL1P37235 193 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 DCTP40126 519 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 RXRGP48443 463 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 WNT3P56703 355 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 PLIN5Q00G26 463 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 RPA4Q13156 261 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 TUBA3CQ13748 450 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 CKAP5Q14008 2032 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 NKG7Q16617 165 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 VMACQ2NL98 169 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 PAGE2BQ5JRK9 111 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 OTUD3Q5T2D3 398 aaPredicted RBP7.82□□□□□ -1.16
SMAD3-212ENST00000559937 OR4F3Q6IEY1 312 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 CAPN13Q6MZZ7 669 aaPredicted RBP7.82□□□□□ -1.16
SMAD3-212ENST00000559937 TMEM214Q6NUQ4 689 aaKnown RBP7.82□□□□□ -1.16
SMAD3-212ENST00000559937 MED27Q6P2C8 311 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 GALNT18Q6P9A2 607 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 ZNF773Q6PK81 442 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 TBPL2Q6SJ96 375 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 UNC5DQ6UXZ4 953 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 SLCO4C1Q6ZQN7 724 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 THAP5Q7Z6K1 395 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 ZDHHC21Q8IVQ6 265 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 LAS2Q8IYD9 372 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 ZZZ3Q8IYH5 903 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 C8orf59Q8N0T1 100 aaPredicted RBP7.82□□□□□ -1.16
SMAD3-212ENST00000559937 FAM86B1Q8N7N1 296 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 ZNF555Q8NEP9 628 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 SETD7Q8WTS6 366 aaKnown RBP7.82□□□□□ -1.16
SMAD3-212ENST00000559937 NUDT8Q8WV74 236 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 SORCS1Q8WY21 1168 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 UBE2E3Q969T4 207 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 RAB7BQ96AH8 199 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 ARRDC3Q96B67 414 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 COQ8BQ96D53 544 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 NUS1Q96E22 293 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 NRBF2Q96F24 287 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 FBXL20Q96IG2 436 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 MAGED4Q96JG8 741 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 ZSWIM3Q96MP5 696 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 INPP5KQ9BT40 448 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 SGPP1Q9BX95 441 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 REXO4Q9GZR2 422 aaKnown RBP7.82□□□□□ -1.16
SMAD3-212ENST00000559937 MTIF3Q9H2K0 278 aaKnown RBP7.82□□□□□ -1.16
SMAD3-212ENST00000559937 DPEP2Q9H4A9 486 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 SGK2Q9HBY8 427 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 TM9SF3Q9HD45 589 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 HPS4Q9NQG7 708 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 AASDHPPTQ9NRN7 309 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 SLC6A13Q9NSD5 602 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 CXXC1Q9P0U4 656 aaPredicted RBP7.82□□□□□ -1.16
SMAD3-212ENST00000559937 PRKAG2Q9UGJ0 569 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 ATP6V1HQ9UI12 483 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 C3orf18Q9UK00 162 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 BLOC1S6Q9UL45 172 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 CDH7Q9ULB5 785 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 DYRK1BQ9Y463 629 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 PCDHB11Q9Y5F2 797 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 ORC6Q9Y5N6 252 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 V9GYQ6 96 aa7.82□□□□□ -1.16
SMAD3-212ENST00000559937 A0A1W2PPC1 479 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 KLHL33A6NCF5 533 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 TMEM202A6NGA9 273 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 SLC16A6O15403 523 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 SPINT1O43278 529 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 DNAJB5O75953 348 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 SLC16A8O95907 504 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 SOD1P00441 154 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 SERPINA1P01009 418 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 SEMG1P04279 462 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 COX7A2P14406 83 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 NELFEP18615 380 aaKnown RBP7.81□□□□□ -1.16
SMAD3-212ENST00000559937 SLC5A2P31639 672 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 PCGF2P35227 344 aa7.81□□□□□ -1.16
SMAD3-212ENST00000559937 SOX11P35716 441 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms