RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 FAM92AA1XBS5 289 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 C2CD4DB7Z1M9 353 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 LOC730098B7Z3J9 87 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 CLDN25C9JDP6 229 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 DCNP07585 359 aaKnown RBP10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 EPS8Q12929 822 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 TOMM20Q15388 145 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 AKAP14Q86UN6 197 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 PGBD5Q8N414 524 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 MAPK15Q8TD08 544 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 ZHX1-C8orf76Q96EF9 292 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 RBM18Q96H35 190 aaKnown RBP10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 PKMYT1Q99640 499 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 ARMC7Q9H6L4 198 aa10.35□□□□□ -0.75
CARMIL3-202ENST00000559694 LOC285095A0A1B0GVY8 99 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 NPHS1O60500 1241 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 NR2F1P10589 423 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 EFNA1P20827 205 aaPredicted RBP10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 GMPRP36959 345 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 ZNF789Q5FWF6 425 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 TRIM69Q86WT6 500 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 STX19Q8N4C7 294 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 SLC44A3Q8N4M1 653 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 TTC29Q8NA56 475 aaPredicted RBP10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 IL17FQ96PD4 163 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 SLC6A17Q9H1V8 727 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 IL21RQ9HBE5 538 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 EQTNQ9NQ60 294 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 IL37Q9NZH6 218 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 MAP10Q9P2G4 905 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 THAP10Q9P2Z0 257 aaPredicted RBP10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 GPR34Q9UPC5 381 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 NUMA1Q14980 2115 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 DOCK5Q9H7D0 1870 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 PLXNB2O15031 1838 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 PRAMEF26H0Y7S4 382 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 TFPTP0C1Z6 253 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 DBTP11182 482 aaKnown RBP10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 NT5EP21589 574 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 CDK9P50750 372 aaKnown RBP10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 NFKB2Q00653 900 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 TLR1Q15399 786 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 OTUD1Q5VV17 481 aaPredicted RBP10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 NCCRP1Q6ZVX7 275 aaPredicted RBP10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 C16orf62Q7Z3J2 963 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 KRT73Q86Y46 540 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 OR52B2Q96RD2 323 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 APOL4Q9BPW4 351 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 RPP25Q9BUL9 199 aaKnown RBP10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 APOOQ9BUR5 198 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 EPB41L1Q9H4G0 881 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 SMPD3Q9NY59 655 aaPredicted RBP10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 C3orf18Q9UK00 162 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 SNX7Q9UNH6 387 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 FAM47E-STBD1D6RA91 191 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 H7BY64 318 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 ALDOAP04075 364 aaKnown RBP10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 POU1F1P28069 291 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 SLC26A3P40879 764 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 RABIFP47224 123 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 CSNK1DP48730 415 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 TPTEP56180 551 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 NDUFA5Q16718 116 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 TMEM164Q5U3C3 297 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 AMER2Q8N7J2 671 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 UBASH3BQ8TF42 649 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 LRCH3Q96II8 777 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 PRAP1Q96NZ9 151 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 C1orf109Q9NX04 203 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 CA5BQ9Y2D0 317 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 IGLV3-25P01717 112 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 CD6P30203 668 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 CSTF2P33240 577 aaKnown RBP eCLIP10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 ASMTP46597 345 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 TOP3AQ13472 1001 aaPredicted RBP10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 COL9A2Q14055 689 aaPredicted RBP10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 ZBED5Q49AG3 693 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 C6orf183Q5T699 404 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 ZCCHC8Q6NZY4 707 aaKnown RBP10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 TMIGD1Q6UXZ0 262 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 CDHR3Q6ZTQ4 885 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 DPPA4Q7L190 304 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 ADGRG6Q86SQ4 1221 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 CEP97Q8IW35 865 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 FOXQ1Q9C009 403 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 NUAK2Q9H093 628 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 INTS6Q9UL03 887 aaKnown RBP10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 ZNF232Q9UNY5 417 aa10.34□□□□□ -0.75
CARMIL3-202ENST00000559694 OR5K4A6NMS3 321 aa10.33□□□□□ -0.76
CARMIL3-202ENST00000559694 TOR1BO14657 336 aa10.33□□□□□ -0.76
CARMIL3-202ENST00000559694 ERI3O43414 337 aaKnown RBP10.33□□□□□ -0.76
CARMIL3-202ENST00000559694 RFPL1O75677 317 aa10.33□□□□□ -0.76
CARMIL3-202ENST00000559694 P2RY2P41231 377 aa10.33□□□□□ -0.76
CARMIL3-202ENST00000559694 RPS9P46781 194 aaKnown RBP10.33□□□□□ -0.76
CARMIL3-202ENST00000559694 AGTR2P50052 363 aa10.33□□□□□ -0.76
CARMIL3-202ENST00000559694 PNLIPRP1P54315 467 aa10.33□□□□□ -0.76
CARMIL3-202ENST00000559694 CDKN2DP55273 166 aa10.33□□□□□ -0.76
CARMIL3-202ENST00000559694 GPAT3Q53EU6 434 aa10.33□□□□□ -0.76
CARMIL3-202ENST00000559694 FRG2Q64ET8 278 aa10.33□□□□□ -0.76
CARMIL3-202ENST00000559694 LIMS2Q7Z4I7 341 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms