RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 CD97P48960 835 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 CDK9P50750 372 aaKnown RBP5.69□□□□□ -1.5
USP3-212ENST00000559276 CSE1LP55060 971 aaKnown RBP5.69□□□□□ -1.5
USP3-212ENST00000559276 DCDC1P59894 354 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 TXNL4AP83876 142 aaKnown RBP5.69□□□□□ -1.5
USP3-212ENST00000559276 SLC25A3Q00325 362 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 TRAP1Q12931 704 aaKnown RBP5.69□□□□□ -1.5
USP3-212ENST00000559276 KLF10Q13118 480 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 PDAP1Q13442 181 aaKnown RBP5.69□□□□□ -1.5
USP3-212ENST00000559276 GPR18Q14330 331 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 PCLAFQ15004 111 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 TLR1Q15399 786 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 MAPRE2Q15555 327 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 PLA2G4EQ3MJ16 856 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 KCTD21Q4G0X4 260 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 MROH9Q5TGP6 573 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 C16orf46Q6P387 395 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 CRTC3Q6UUV7 619 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 ABRAXAS1Q6UWZ7 409 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 NPNTQ6UXI9 565 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 PACS1Q6VY07 963 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 CERS6Q6ZMG9 384 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 FAM83HQ6ZRV2 1179 aaPredicted RBP5.69□□□□□ -1.5
USP3-212ENST00000559276 KDELC2Q7Z4H8 507 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 PRSS42Q7Z5A4 293 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 SATL1Q86VE3 508 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 PACRGLQ8N7B6 248 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 GALNT6Q8NCL4 622 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 TNIP2Q8NFZ5 429 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 SPATA22Q8NHS9 363 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 FBXO27Q8NI29 283 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 C9orf43Q8TAL5 461 aaPredicted RBP5.69□□□□□ -1.5
USP3-212ENST00000559276 APOBEC4Q8WW27 367 aaKnown RBP5.69□□□□□ -1.5
USP3-212ENST00000559276 KLHL6Q8WZ60 621 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 GLYATL1Q969I3 302 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 SH3KBP1Q96B97 665 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 MPP4Q96JB8 637 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 FAR2Q96K12 515 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 CLPTM1LQ96KA5 538 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 ZNF778Q96MU6 729 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 SPATA13Q96N96 652 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 SORT1Q99523 831 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 EFHD1Q9BUP0 239 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 MECRQ9BV79 373 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.69□□□□□ -1.5
USP3-212ENST00000559276 NUF2Q9BZD4 464 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 ILKAPQ9H0C8 392 aaPredicted RBP5.69□□□□□ -1.5
USP3-212ENST00000559276 C12orf65Q9H3J6 166 aaKnown RBP5.69□□□□□ -1.5
USP3-212ENST00000559276 ZNF768Q9H5H4 540 aaKnown RBP5.69□□□□□ -1.5
USP3-212ENST00000559276 ZFYVE1Q9HBF4 777 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 PLAC1Q9HBJ0 212 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 MAGEE1Q9HCI5 957 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 PALMDQ9NP74 551 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 PKD2L2Q9NZM6 624 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 SEMA5BQ9P283 1151 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 SUCOQ9UBS9 1254 aaKnown RBP5.69□□□□□ -1.5
USP3-212ENST00000559276 RIMS3Q9UJD0 308 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 ANAPC2Q9UJX6 822 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 CROTQ9UKG9 612 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 EMCNQ9ULC0 261 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 TP53TG5Q9Y2B4 290 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 MAN2B2Q9Y2E5 1009 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 RAP2CQ9Y3L5 183 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 ZNF711Q9Y462 761 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 PCDHGA6Q9Y5G7 932 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 RPS6KL1Q9Y6S9 549 aa5.69□□□□□ -1.5
USP3-212ENST00000559276 IGHV5-51A0A0C4DH38 117 aa5.68□□□□□ -1.5
USP3-212ENST00000559276 TRIM64CA6NLI5 447 aa5.68□□□□□ -1.5
USP3-212ENST00000559276 TTC36A6NLP5 189 aa5.68□□□□□ -1.5
USP3-212ENST00000559276 OR5K4A6NMS3 321 aa5.68□□□□□ -1.5
USP3-212ENST00000559276 POM121CA8CG34 1229 aa5.68□□□□□ -1.5
USP3-212ENST00000559276 GPR89AB7ZAQ6 455 aa5.68□□□□□ -1.5
USP3-212ENST00000559276 MATN2O00339 956 aa5.68□□□□□ -1.5
USP3-212ENST00000559276 TXNDC9O14530 226 aa5.68□□□□□ -1.5
USP3-212ENST00000559276 GAPDHSO14556 408 aaPredicted RBP5.68□□□□□ -1.5
USP3-212ENST00000559276 TOX3O15405 576 aaPredicted RBP5.68□□□□□ -1.5
USP3-212ENST00000559276 MTSS1O43312 755 aa5.68□□□□□ -1.5
USP3-212ENST00000559276 TRIM13O60858 407 aa5.68□□□□□ -1.5
USP3-212ENST00000559276 DNAJB5O75953 348 aa5.68□□□□□ -1.5
USP3-212ENST00000559276 USP1O94782 785 aa5.68□□□□□ -1.5
USP3-212ENST00000559276 UBXN7O94888 489 aa5.68□□□□□ -1.5
USP3-212ENST00000559276 SLC25A14O95258 325 aaPredicted RBP5.68□□□□□ -1.5
USP3-212ENST00000559276 BMP10O95393 424 aa5.68□□□□□ -1.5
USP3-212ENST00000559276 HSPA4LO95757 839 aa5.68□□□□□ -1.5
USP3-212ENST00000559276 ALDOAP04075 364 aaKnown RBP5.68□□□□□ -1.5
USP3-212ENST00000559276 POLBP06746 335 aa5.68□□□□□ -1.5
USP3-212ENST00000559276 GPR89BP0CG08 455 aa5.68□□□□□ -1.5
USP3-212ENST00000559276 FOLR1P15328 257 aa5.68□□□□□ -1.5
USP3-212ENST00000559276 NELFEP18615 380 aaKnown RBP5.68□□□□□ -1.5
USP3-212ENST00000559276 CDH2P19022 906 aaPredicted RBP5.68□□□□□ -1.5
USP3-212ENST00000559276 TCN2P20062 427 aa5.68□□□□□ -1.5
USP3-212ENST00000559276 ME2P23368 584 aa5.68□□□□□ -1.5
USP3-212ENST00000559276 RPL10P27635 214 aaKnown RBP5.68□□□□□ -1.5
USP3-212ENST00000559276 RBL1P28749 1068 aa5.68□□□□□ -1.5
USP3-212ENST00000559276 SPRP35270 261 aaPredicted RBP5.68□□□□□ -1.5
USP3-212ENST00000559276 DLSTP36957 453 aa5.68□□□□□ -1.5
USP3-212ENST00000559276 PPARGP37231 505 aaPredicted RBP5.68□□□□□ -1.5
USP3-212ENST00000559276 CAPZBP47756 277 aa5.68□□□□□ -1.5
USP3-212ENST00000559276 ALDH3B2P48448 385 aa5.68□□□□□ -1.5
USP3-212ENST00000559276 SEPHS1P49903 392 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms