RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 SLC35G6P0C7Q6 338 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 CCND3P30281 292 aaPredicted RBP13.62□□□□□ -0.23
SPG11-210ENST00000558319 CDKN2BP42772 138 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 GRK6P43250 576 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 CD97P48960 835 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 SLC10A7Q0GE19 358 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 ILF3Q12906 894 aaKnown RBP eCLIP13.62□□□□□ -0.23
SPG11-210ENST00000558319 SCARB2Q14108 478 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 BATFQ16520 125 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 SLC24A5Q71RS6 500 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 SSX6Q7RTT6 188 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 CNDP2Q96KP4 475 aaKnown RBP13.62□□□□□ -0.23
SPG11-210ENST00000558319 ARHGAP9Q9BRR9 750 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 BCAS3Q9H6U6 928 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 C14orf119Q9NWQ9 140 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 VNN3Q9NY84 501 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 NUDT4Q9NZJ9 180 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 UBQLN2Q9UHD9 624 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 A0A1W2PPW3 197 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 CLDN11O75508 207 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 RP2O75695 350 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 ELK4P28324 431 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 RPS24P62847 133 aaKnown RBP13.62□□□□□ -0.23
SPG11-210ENST00000558319 LRRC32Q14392 662 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 PIAS4Q8N2W9 510 aaPredicted RBP13.62□□□□□ -0.23
SPG11-210ENST00000558319 FAM46DQ8NEK8 389 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 PTPRMP28827 1452 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 ARPC2O15144 300 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 CD2P06729 351 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 MAPK8P45983 427 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 SULT2A1Q06520 285 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 BANPQ8N9N5 519 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 GATSQ8NAP1 163 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 SLC13A3Q8WWT9 602 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 MEAF6Q9HAF1 191 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 LYARQ9NX58 379 aaKnown RBP13.62□□□□□ -0.23
SPG11-210ENST00000558319 B3GALT2O43825 422 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 FARS2O95363 451 aaKnown RBP13.62□□□□□ -0.23
SPG11-210ENST00000558319 FOSL1P15407 271 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 PTPN2P17706 415 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 PTGIRP43119 386 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 GDF10P55107 478 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 TMEM53Q6P2H8 277 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 PDSS2Q86YH6 399 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 C7orf34Q96L11 122 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 IL1RAPQ9NPH3 570 aa13.62□□□□□ -0.23
SPG11-210ENST00000558319 A0A1B0GV50 99 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 IFNA21P01568 189 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 ACTR1BP42025 376 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 ACTR1AP61163 376 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 TRMT10BQ6PF06 316 aaKnown RBP13.61□□□□□ -0.23
SPG11-210ENST00000558319 TTLL10Q6ZVT0 673 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 TMEM139Q8IV31 216 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 SLC35G5Q96KT7 338 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 HIST1H2AAQ96QV6 131 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 RCOR3Q9P2K3 495 aaPredicted RBP13.61□□□□□ -0.23
SPG11-210ENST00000558319 LGALS13Q9UHV8 139 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 PPRC1Q5VV67 1664 aaKnown RBP13.61□□□□□ -0.23
SPG11-210ENST00000558319 ENTPD6O75354 484 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 OGNP20774 298 aaKnown RBP13.61□□□□□ -0.23
SPG11-210ENST00000558319 KELP23276 732 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 SNU13P55769 128 aaKnown RBP13.61□□□□□ -0.23
SPG11-210ENST00000558319 DSC3Q14574 896 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 ZNF101Q8IZC7 436 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 KLRG1Q96E93 195 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 COL20A1Q9P218 1284 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 GLOD5A6NK44 160 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 DISC1C4P0D8 188 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 ADRA1BP35368 520 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 PIGFQ07326 219 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 DSG2Q14126 1118 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 TEAD4Q15561 434 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 SH3RF2Q8TEC5 729 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 NCSTNQ92542 709 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 ZNF347Q96SE7 839 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 PKP4Q99569 1192 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 TSNAXQ99598 290 aaKnown RBP13.61□□□□□ -0.23
SPG11-210ENST00000558319 IL36AQ9UHA7 158 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 TCAF1Q9Y4C2 921 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 KERAO60938 352 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 GLDCP23378 1020 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 AIMP2Q13155 320 aaKnown RBP13.61□□□□□ -0.23
SPG11-210ENST00000558319 CCINQ13939 588 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 MAPK14Q16539 360 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 HSD17B12Q53GQ0 312 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 CYP2U1Q7Z449 544 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 OR4E2Q8NGC2 313 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 PEX13Q92968 403 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 HSPA12BQ96MM6 686 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 TM9SF2Q99805 663 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 C7orf50Q9BRJ6 194 aaKnown RBP13.61□□□□□ -0.23
SPG11-210ENST00000558319 ZNF510Q9Y2H8 683 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 TMEM233B4DJY2 109 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 H0YJX3 145 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 CDC7O00311 574 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 PRAMEF12O95522 483 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 KRBOX4Q5JUW0 171 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 SYVN1Q86TM6 617 aa13.61□□□□□ -0.23
SPG11-210ENST00000558319 BOLLQ8N9W6 283 aaKnown RBP13.61□□□□□ -0.23
SPG11-210ENST00000558319 KREMEN2Q8NCW0 462 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms