RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 ACKR1Q16570 336 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 ZNF658BQ4V348 819 aaPredicted RBP8.8□□□□□ -1
NEDD1-211ENST00000557454 WIPI1Q5MNZ9 446 aaPredicted RBP8.8□□□□□ -1
NEDD1-211ENST00000557454 KLHDC7AQ5VTJ3 777 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 SEM1Q6ZVN7 128 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 SPNS2Q8IVW8 549 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 OR4N4Q8N0Y3 316 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 C2orf73Q8N5S3 287 aaPredicted RBP8.8□□□□□ -1
NEDD1-211ENST00000557454 MEIOBQ8N635 442 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 M1APQ8TC57 530 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 DTX3LQ8TDB6 740 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 HSPH1Q92598 858 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 THAP11Q96EK4 314 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 CABS1Q96KC9 395 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 CNPPD1Q9BV87 410 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 TRMT1Q9NXH9 659 aaKnown RBP8.8□□□□□ -1
NEDD1-211ENST00000557454 ALKBH4Q9NXW9 302 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.8□□□□□ -1
NEDD1-211ENST00000557454 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.8□□□□□ -1
NEDD1-211ENST00000557454 MAN1B1Q9UKM7 699 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 EIF3LQ9Y262 564 aaKnown RBP8.8□□□□□ -1
NEDD1-211ENST00000557454 ASF1AQ9Y294 204 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 FAM169AQ9Y6X4 670 aa8.8□□□□□ -1
NEDD1-211ENST00000557454 QSOX1O00391 747 aa8.79□□□□□ -1
NEDD1-211ENST00000557454 PRPF4O43172 522 aaKnown RBP eCLIP8.79□□□□□ -1
NEDD1-211ENST00000557454 NRP2O60462 931 aa8.79□□□□□ -1
NEDD1-211ENST00000557454 UCHL3P15374 230 aa8.79□□□□□ -1
NEDD1-211ENST00000557454 IL1R2P27930 398 aa8.79□□□□□ -1
NEDD1-211ENST00000557454 PPIAP62937 165 aaKnown RBP8.79□□□□□ -1
NEDD1-211ENST00000557454 MAT1AQ00266 395 aaKnown RBP8.79□□□□□ -1
NEDD1-211ENST00000557454 DEFA6Q01524 100 aa8.79□□□□□ -1
NEDD1-211ENST00000557454 VEZF1Q14119 521 aa8.79□□□□□ -1
NEDD1-211ENST00000557454 HYAL4Q2M3T9 481 aa8.79□□□□□ -1
NEDD1-211ENST00000557454 CCDC38Q502W7 563 aa8.79□□□□□ -1
NEDD1-211ENST00000557454 ZDHHC20Q5W0Z9 365 aa8.79□□□□□ -1
NEDD1-211ENST00000557454 RPS19BP1Q86WX3 136 aaKnown RBP8.79□□□□□ -1
NEDD1-211ENST00000557454 KIF2BQ8N4N8 673 aa8.79□□□□□ -1
NEDD1-211ENST00000557454 MMABQ96EY8 250 aaPredicted RBP8.79□□□□□ -1
NEDD1-211ENST00000557454 REG4Q9BYZ8 158 aa8.79□□□□□ -1
NEDD1-211ENST00000557454 TRIM45Q9H8W5 580 aaPredicted RBP8.79□□□□□ -1
NEDD1-211ENST00000557454 ZDHHC11Q9H8X9 412 aa8.79□□□□□ -1
NEDD1-211ENST00000557454 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.79□□□□□ -1
NEDD1-211ENST00000557454 INTS7Q9NVH2 962 aaKnown RBP8.79□□□□□ -1
NEDD1-211ENST00000557454 C19orf25Q9UFG5 118 aaPredicted RBP8.79□□□□□ -1
NEDD1-211ENST00000557454 ACAD8Q9UKU7 415 aa8.79□□□□□ -1
NEDD1-211ENST00000557454 A0A0J9YVX5 310 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 SH3D21A4FU49 640 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 PINLYPA6NC86 204 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 KCNK1O00180 336 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 SRPX2O60687 465 aaPredicted RBP8.78□□□□□ -1
NEDD1-211ENST00000557454 RNF8O76064 485 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 FGFR1OPO95684 399 aaKnown RBP8.78□□□□□ -1
NEDD1-211ENST00000557454 ANXA5P08758 320 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 ERVK-10P10266 1014 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 TCF4P15884 667 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 CCNCP24863 283 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 PKLRP30613 574 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 SLC26A3P40879 764 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 HLCSP50747 726 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 WNT3P56703 355 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 ZBTB17Q13105 803 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 PKP1Q13835 747 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 IFI16Q16666 785 aaKnown RBP8.78□□□□□ -1
NEDD1-211ENST00000557454 MAN2A1Q16706 1144 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 MINDY4Q4G0A6 757 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 MFSD4BQ5TF39 518 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 PAPD4Q6PIY7 484 aaKnown RBP8.78□□□□□ -1
NEDD1-211ENST00000557454 POMZP3Q6PJE2 187 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 C12orf54Q6X4T0 127 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 ANKRD37Q7Z713 158 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 TBC1D21Q8IYX1 336 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 CNTD1Q8N815 330 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 LINC01555Q8NAE3 123 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 ZNF398Q8TD17 642 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 FATE1Q969F0 183 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 ZBED6CLQ96FA7 236 aaPredicted RBP8.78□□□□□ -1
NEDD1-211ENST00000557454 DCUN1D1Q96GG9 259 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 DACH2Q96NX9 599 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 CYTH2Q99418 400 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 BEX2Q9BXY8 128 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 STK33Q9BYT3 514 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 CEP41Q9BYV8 373 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 C6orf203Q9P0P8 240 aaPredicted RBP8.78□□□□□ -1
NEDD1-211ENST00000557454 CDC14AQ9UNH5 594 aa8.78□□□□□ -1
NEDD1-211ENST00000557454 CR1P17927 2039 aa8.77□□□□□ -1.01
NEDD1-211ENST00000557454 OR2W5A6NFC9 320 aa8.77□□□□□ -1.01
NEDD1-211ENST00000557454 ARHGEF33A8MVX0 844 aa8.77□□□□□ -1.01
NEDD1-211ENST00000557454 EEF1E1-BLOC1S5C9J1V9 151 aa8.77□□□□□ -1.01
NEDD1-211ENST00000557454 SIAH2O43255 324 aa8.77□□□□□ -1.01
NEDD1-211ENST00000557454 EEF1E1O43324 174 aaKnown RBP8.77□□□□□ -1.01
NEDD1-211ENST00000557454 NDST3O95803 873 aa8.77□□□□□ -1.01
NEDD1-211ENST00000557454 IGHG3P01860 377 aa8.77□□□□□ -1.01
NEDD1-211ENST00000557454 TRHRP34981 398 aaPredicted RBP8.77□□□□□ -1.01
NEDD1-211ENST00000557454 THBS2P35442 1172 aa8.77□□□□□ -1.01
NEDD1-211ENST00000557454 SOX5P35711 763 aa8.77□□□□□ -1.01
NEDD1-211ENST00000557454 MTIF2P46199 727 aaKnown RBP8.77□□□□□ -1.01
NEDD1-211ENST00000557454 ATP5J2P56134 94 aa8.77□□□□□ -1.01
NEDD1-211ENST00000557454 PLGLB1Q02325 96 aa8.77□□□□□ -1.01
NEDD1-211ENST00000557454 RPA4Q13156 261 aa8.77□□□□□ -1.01
NEDD1-211ENST00000557454 MMRN1Q13201 1228 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms