RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 DTX3LQ8TDB6 740 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 ISL2Q96A47 359 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 ZBED6CLQ96FA7 236 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-245ENST00000556958 SH3GL2Q99962 352 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 PLCD4Q9BRC7 762 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 REG4Q9BYZ8 158 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 GPR63Q9BZJ6 419 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 SCAND2PQ9GZW5 306 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-245ENST00000556958 SHARPINQ9H0F6 387 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 DHX35Q9H5Z1 703 aaKnown RBP5.4□□□□□ -1.54
ATXN3-245ENST00000556958 MAGEE1Q9HCI5 957 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 PNPLA3Q9NST1 481 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 INTS7Q9NVH2 962 aaKnown RBP5.4□□□□□ -1.54
ATXN3-245ENST00000556958 TMEM160Q9NX00 188 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 OR6C2Q9NZP2 312 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 ZNF629Q9UEG4 869 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-245ENST00000556958 C19orf25Q9UFG5 118 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-245ENST00000556958 AMACRQ9UHK6 382 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 ACAD8Q9UKU7 415 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 SOX13Q9UN79 622 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 NPFFR2Q9Y5X5 522 aa5.4□□□□□ -1.54
ATXN3-245ENST00000556958 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.39□□□□□ -1.554e-12■■■□□ 18.3
ATXN3-245ENST00000556958 FITM1A5D6W6 292 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 SIGLEC16A6NMB1 481 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 ISM1B1AKI9 464 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 PSMA7O14818 248 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 PEX1O43933 1283 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 SOX30O94993 753 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 CHRM5P08912 532 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-245ENST00000556958 C8orf89P0DMQ9 161 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 MSH3P20585 1137 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 BMP5P22003 454 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 FBLP22087 321 aaKnown RBP5.39□□□□□ -1.55
ATXN3-245ENST00000556958 MMP8P22894 467 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 CMA1P23946 247 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 ARL4AP40617 200 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 SYKP43405 635 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 CD151P48509 253 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 PMS1P54277 932 aaKnown RBP5.39□□□□□ -1.55
ATXN3-245ENST00000556958 VSX2P58304 361 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-245ENST00000556958 RAC1P63000 192 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 DSC2Q02487 901 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 PRKG2Q13237 762 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 KIR2DS3Q14952 304 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 ETFDHQ16134 617 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 PPP2R5EQ16537 467 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 MUM1Q2TAK8 710 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 FIGNQ5HY92 759 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 ERMARDQ5T6L9 678 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 C1orf185Q5T7R7 199 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 WLSQ5T9L3 541 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 ZNF658Q5TYW1 1059 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-245ENST00000556958 TAF3Q5VWG9 929 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 ATL3Q6DD88 541 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 CCDC70Q6NSX1 233 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 FBXO42Q6P3S6 717 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 TMEM205Q6UW68 189 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 TMCO3Q6UWJ1 677 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 UNC5AQ6ZN44 842 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 GBP6Q6ZN66 633 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 ARHGEF18Q6ZSZ5 1173 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 MAATS1Q7Z4T9 603 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 TRIM59Q8IWR1 403 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 METTL27Q8N6F8 245 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-245ENST00000556958 TEX26Q8N6G2 289 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 PHC3Q8NDX5 983 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 WFDC12Q8WWY7 111 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 SLC22A18Q96BI1 424 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 EID2BQ96D98 161 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 MEGF10Q96KG7 1140 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 RMDN2Q96LZ7 410 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 CSPG4P5Q96PW8 444 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 ZFYVE21Q9BQ24 234 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 CRACR2AQ9BSW2 395 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 TRIM7Q9C029 511 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 TGIF2Q9GZN2 237 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 DEFB127Q9H1M4 99 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 CXorf56Q9H5V9 222 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 XKR8Q9H6D3 395 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 ZWILCHQ9H900 591 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 MKKSQ9NPJ1 570 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-245ENST00000556958 ALKBH4Q9NXW9 302 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 TRPC4Q9UBN4 977 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 NDRG3Q9UGV2 375 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 CFAP45Q9UL16 551 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 TMPRSS11EQ9UL52 423 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 AP4E1Q9UPM8 1137 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 SHOC2Q9UQ13 582 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 FAM215AQ9Y5M1 114 aa5.39□□□□□ -1.55
ATXN3-245ENST00000556958 ANK3Q12955 4377 aaKnown RBP5.39□□□□□ -1.55
ATXN3-245ENST00000556958 A0A1B0GVL5 298 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 A0A1W2PPR1 153 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 FAM170AA1A519 330 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 H3BRJ5 948 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 ACOT7O00154 380 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 NDC80O14777 642 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 CCP110O43303 1012 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 SLC4A1P02730 911 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 CYC1P08574 325 aa5.38□□□□□ -1.55
ATXN3-245ENST00000556958 PAX1P15863 534 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms