RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 TTC30BQ8N4P2 665 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 OR6J1Q8NGC5 347 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 OR2AJ1Q8NGZ0 328 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 MOSPD2Q8NHP6 518 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 SPATA20Q8TB22 786 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 ZFAND2BQ8WV99 257 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 VPS33AQ96AX1 596 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 NXNL1Q96CM4 212 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 HDAC11Q96DB2 347 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 MTERF3Q96E29 417 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 ARSGQ96EG1 525 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 CFAP57Q96MR6 1250 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 OLFM1Q99784 485 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 SLX1AQ9BQ83 275 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 LRRC1Q9BTT6 524 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 FNDC11Q9BVV2 318 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 PORCNQ9H237 461 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 DPAGT1Q9H3H5 408 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 NOL11Q9H8H0 719 aaKnown RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 EVA1AQ9H8M9 152 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 ANKZF1Q9H8Y5 726 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 ERVMER34-1Q9H9K5 563 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 TBC1D17Q9HA65 648 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 CD209Q9NNX6 404 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 PIH1D3Q9NQM4 214 aaKnown RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 TMOD2Q9NZR1 351 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 MUTYHQ9UIF7 546 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 COL11A1P12107 1806 aaPredicted RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 PLXNA3P51805 1871 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 KMT2EQ8IZD2 1858 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 UMODL1Q5DID0 1318 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 FAM205AQ6ZU69 1335 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 CSMD1Q96PZ7 3565 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 NOTCH3Q9UM47 2321 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 ATG2AQ2TAZ0 1938 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 GREB1LQ9C091 1923 aaPredicted RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 GCN1Q92616 2671 aaKnown RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 DMXL2Q8TDJ6 3036 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 TEX13DA0A0J9YY54 714 aaPredicted RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 TSPY2A6NKD2 308 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 KBTBD13C9JR72 458 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 C16orf97H3BN30 126 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 MAST4O15021 2626 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 SPRY1O43609 319 aaPredicted RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 DIAPH2O60879 1101 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 PDE9AO76083 593 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 FYNP06241 537 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 H1F0P07305 194 aaKnown RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 CCDC175P0C221 793 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 OR2T7P0C7T2 308 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 DANCRP0C864 163 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 TSPY3P0CV98 308 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 TSPY8P0CW00 308 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 IGF2RP11717 2491 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 DGKAP23743 735 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 SLC9A3P48764 834 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 FMO5P49326 533 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 RAB28P51157 221 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 RAD23AP54725 363 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 PRMT2P55345 433 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 CCL23P55773 120 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 DLX5P56178 289 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 PITX1P78337 314 aaPredicted RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 TSPY1Q01534 308 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 GAGE5Q13069 117 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 GAGE6Q13070 117 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 SPP2Q13103 211 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 PRKAA1Q13131 559 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 PPIL2Q13356 520 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 PDSS1Q5T2R2 415 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 ARMC4Q5T2S8 1044 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 GFI1BQ5VTD9 330 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 FAM198BQ6UWH4 519 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 RBPMS2Q6ZRY4 209 aaKnown RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 KCTD8Q6ZWB6 473 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 CCDC186Q7Z3E2 898 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 PIWIL4Q7Z3Z4 852 aaKnown RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 DEFB128Q7Z7B8 93 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 CENPVQ7Z7K6 275 aaPredicted RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 DSG4Q86SJ6 1040 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 SLC9B2Q86UD5 537 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 METTL27Q8N6F8 245 aaPredicted RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 MAB21L3Q8N8X9 362 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 L3MBTL4Q8NA19 623 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 XXYLT1Q8NBI6 393 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 POC1AQ8NBT0 407 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 PRSS33Q8NF86 280 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 DAZLQ92904 295 aaKnown RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 CD101Q93033 1021 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 SLAMF9Q96A28 289 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 LINC00615Q96LM1 132 aaPredicted RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 ZMAT2Q96NC0 199 aaKnown RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 PKP4Q99569 1192 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 SEPHS2Q99611 448 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 LMF2Q9BU23 707 aaKnown RBP1.43□□□□□ -2.18
PRPF39-208ENST00000554785 ABHD6Q9BV23 337 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 NUP85Q9BW27 656 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 ANKRD2Q9GZV1 360 aa1.43□□□□□ -2.18
PRPF39-208ENST00000554785 COA1Q9GZY4 146 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms