RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 GATA3P23771 443 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 S100PP25815 95 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 ADORA2AP29274 412 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 EEF1DP29692 281 aaKnown RBP4.3□□□□□ -1.72
ATXN3-227ENST00000554491 PPM1AP35813 382 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 ENTPD1P49961 510 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 MEOX2P50222 304 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 CPT1AP50416 773 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 SERPINB9P50453 376 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 RAB13P51153 203 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 CLCN5P51795 746 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 RIDAP52758 137 aaKnown RBP4.3□□□□□ -1.72
ATXN3-227ENST00000554491 ACLYP53396 1101 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 CASP9P55211 416 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 BACE1P56817 501 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 ARF5P84085 180 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 GALK2Q01415 458 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 ITKQ08881 620 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 ST3GAL1Q11201 340 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 ABRQ12979 859 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 DMP1Q13316 513 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-227ENST00000554491 KCNC3Q14003 757 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 HABP2Q14520 560 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-227ENST00000554491 ODF1Q14990 250 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 CHRNA6Q15825 494 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 ZNF674Q2M3X9 581 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 EIF2S3LQ2VIR3 472 aaKnown RBP4.3□□□□□ -1.72
ATXN3-227ENST00000554491 TRIM16LQ309B1 348 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 IQCCQ4KMZ1 466 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 CDKL4Q5MAI5 379 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 ERMARDQ5T6L9 678 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 TSTD2Q5T7W7 516 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 ELP2Q6IA86 826 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 SLC25A24Q6NUK1 477 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 SCYL2Q6P3W7 929 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 LRRC74BQ6ZQY2 392 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 HEATR3Q7Z4Q2 680 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 GRASPQ7Z6J2 395 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-227ENST00000554491 AMIGO2Q86SJ2 522 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 DSG4Q86SJ6 1040 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 RFX6Q8HWS3 928 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 PHC2Q8IXK0 858 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 OR8H3Q8N146 312 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 NAGSQ8N159 534 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 PRR18Q8N4B5 295 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 MMGT1Q8N4V1 131 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 DCBLD1Q8N8Z6 715 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 EIF1ADQ8N9N8 165 aaKnown RBP4.3□□□□□ -1.72
ATXN3-227ENST00000554491 TTC29Q8NA56 475 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-227ENST00000554491 FNDC5Q8NAU1 212 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 OR6B3Q8NGW1 331 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 LRRC20Q8TCA0 184 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 KCNG4Q8TDN1 519 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 UBLCP1Q8WVY7 318 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-227ENST00000554491 RFFLQ8WZ73 363 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 CPT1BQ92523 772 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 ZUFSPQ96AP4 578 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 RHBDF1Q96CC6 855 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 TXNDC15Q96J42 360 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 PPP1R36Q96LQ0 422 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 C9orf72Q96LT7 481 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 CSPG4P5Q96PW8 444 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 CCNL2Q96S94 520 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-227ENST00000554491 SMAD5Q99717 465 aaKnown RBP4.3□□□□□ -1.72
ATXN3-227ENST00000554491 KCNS3Q9BQ31 491 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 SLC25A23Q9BV35 468 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 TXLNGYQ9BZA5 131 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 CCDC8Q9H0W5 538 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-227ENST00000554491 ALX4Q9H161 411 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-227ENST00000554491 BOLA2Q9H3K6 86 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 ARMC7Q9H6L4 198 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 TMBIM4Q9HC24 238 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 IFT46Q9NQC8 304 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 DNAJC28Q9NX36 388 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 TAS2R3Q9NYW6 316 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-227ENST00000554491 GRHPRQ9UBQ7 328 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 GLS2Q9UI32 602 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 TUBE1Q9UJT0 475 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 STOML2Q9UJZ1 356 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 RALYQ9UKM9 306 aaKnown RBP4.3□□□□□ -1.72
ATXN3-227ENST00000554491 CDH7Q9ULB5 785 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 FAM50BQ9Y247 325 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 KCNE2Q9Y6J6 123 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 MAU2Q9Y6X3 613 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 VPS13AQ96RL7 3174 aa4.3□□□□□ -1.72
ATXN3-227ENST00000554491 MYH8P13535 1937 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 SALL1Q9NSC2 1324 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 A0A1W2PRG0 241 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 A0A1W2PS29 197 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 FAM47DPA6NHR8 397 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 OR6C70A6NIJ9 312 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 MEI4A8MW99 385 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 B4E171 279 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 H3BNX3 289 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 PODXLO00592 558 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 TRAFD1O14545 582 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-227ENST00000554491 OGTO15294 1046 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 MPPED1O15442 326 aa4.29□□□□□ -1.72
ATXN3-227ENST00000554491 PROM1O43490 865 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms