RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 CCR8P51685 355 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 POLR2JP52435 117 aaKnown RBP12.13□□□□□ -0.47
CACNB3-217ENST00000550483 DIO3P55073 304 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 ACTR1AP61163 376 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 REP15Q6BDI9 236 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 PAOXQ6QHF9 649 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 CYP20A1Q6UW02 462 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 SCIMPQ6UWF3 145 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 BNC2Q6ZN30 1099 aaPredicted RBP12.13□□□□□ -0.47
CACNB3-217ENST00000550483 GK5Q6ZS86 529 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 MSANTD1Q6ZTZ1 278 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 NET1Q7Z628 596 aaPredicted RBP12.13□□□□□ -0.47
CACNB3-217ENST00000550483 HID1Q8IV36 788 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 ULK2Q8IYT8 1036 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 PHACTR4Q8IZ21 702 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 DSELQ8IZU8 1212 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 PPFIBP2Q8ND30 876 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 FAM13CQ8NE31 585 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 OR7G3Q8NG95 312 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 JADE3Q92613 823 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 UTP4Q969X6 686 aaKnown RBP12.13□□□□□ -0.47
CACNB3-217ENST00000550483 RCN3Q96D15 328 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 CXorf40BQ96DE9 158 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 SPDL1Q96EA4 605 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 WDR41Q9HAD4 459 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 AASDHPPTQ9NRN7 309 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 GEMIN8Q9NWZ8 242 aaKnown RBP12.13□□□□□ -0.47
CACNB3-217ENST00000550483 AHSPQ9NZD4 102 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 AP3M1Q9Y2T2 418 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 WBP11Q9Y2W2 641 aaKnown RBP12.13□□□□□ -0.47
CACNB3-217ENST00000550483 PCDHGA2Q9Y5H1 932 aa12.13□□□□□ -0.47
CACNB3-217ENST00000550483 GPR179Q6PRD1 2367 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 PIPSLA2A3N6 862 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 A6NCN8 305 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 CCDC154A6NI56 674 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 MEI4A8MW99 385 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 NR5A2O00482 541 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 PRAMEF4O60810 478 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 EEDO75530 441 aaKnown RBP12.12□□□□□ -0.47
CACNB3-217ENST00000550483 SEMA3DO95025 777 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 CTSEP14091 401 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 XRCC1P18887 633 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-217ENST00000550483 CD22P20273 847 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 CD38P28907 300 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 GRK3P35626 688 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 RPL3P39023 403 aaKnown RBP12.12□□□□□ -0.47
CACNB3-217ENST00000550483 GSTM5P46439 218 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 ARFIP1P53367 373 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 C21orf58P58505 322 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 SLC25A3Q00325 362 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 PRDX1Q06830 199 aaKnown RBP12.12□□□□□ -0.47
CACNB3-217ENST00000550483 ACSM2AQ08AH3 577 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 TBL3Q12788 808 aaKnown RBP12.12□□□□□ -0.47
CACNB3-217ENST00000550483 TSTA3Q13630 321 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-217ENST00000550483 SLBPQ14493 270 aaKnown RBP eCLIP12.12□□□□□ -0.47
CACNB3-217ENST00000550483 CLCA4Q14CN2 919 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 KIAA0040Q15053 153 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 RFTN2Q52LD8 501 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-217ENST00000550483 SGO1Q5FBB7 561 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 WDR45BQ5MNZ6 344 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 PRAMEF9Q5VWM5 478 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 ACSM2BQ68CK6 577 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 DEFB107AQ8IZN7 70 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 OR4K1Q8NGD4 311 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 OR52E1Q8NGJ3 308 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 SNX19Q92543 992 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 CENPKQ9BS16 269 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 THTPAQ9BU02 230 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 C1orf50Q9BV19 199 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 TPSD1Q9BZJ3 242 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 DPY30Q9C005 99 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 RHBGQ9H310 441 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 EBF2Q9HAK2 575 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 PRDM8Q9NQV8 689 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 ANKMY1Q9P2S6 941 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 TAC3Q9UHF0 121 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 CROTQ9UKG9 612 aa12.12□□□□□ -0.47
CACNB3-217ENST00000550483 POLR3HQ9Y535 204 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-217ENST00000550483 ZFC3H1O60293 1989 aaKnown RBP12.11□□□□□ -0.47
CACNB3-217ENST00000550483 DNAJA2O60884 412 aa12.11□□□□□ -0.47
CACNB3-217ENST00000550483 G6PDP11413 515 aa12.11□□□□□ -0.47
CACNB3-217ENST00000550483 PCNAP12004 261 aa12.11□□□□□ -0.47
CACNB3-217ENST00000550483 AMD1P17707 334 aa12.11□□□□□ -0.47
CACNB3-217ENST00000550483 PRPS1L1P21108 318 aa12.11□□□□□ -0.47
CACNB3-217ENST00000550483 PTX3P26022 381 aaPredicted RBP12.11□□□□□ -0.47
CACNB3-217ENST00000550483 VARSP26640 1264 aaKnown RBP12.11□□□□□ -0.47
CACNB3-217ENST00000550483 CMPK1P30085 196 aa12.11□□□□□ -0.47
CACNB3-217ENST00000550483 HNRNPFP52597 415 aaKnown RBP12.11□□□□□ -0.47
CACNB3-217ENST00000550483 MTTPP55157 894 aa12.11□□□□□ -0.47
CACNB3-217ENST00000550483 CLDN8P56748 225 aa12.11□□□□□ -0.47
CACNB3-217ENST00000550483 REEP5Q00765 189 aa12.11□□□□□ -0.47
CACNB3-217ENST00000550483 HMGCS1Q01581 520 aa12.11□□□□□ -0.47
CACNB3-217ENST00000550483 RPL6Q02878 288 aaKnown RBP12.11□□□□□ -0.47
CACNB3-217ENST00000550483 LRRC74AQ0VAA2 488 aa12.11□□□□□ -0.47
CACNB3-217ENST00000550483 MTAPQ13126 283 aa12.11□□□□□ -0.47
CACNB3-217ENST00000550483 FZD2Q14332 565 aa12.11□□□□□ -0.47
CACNB3-217ENST00000550483 ELOCQ15369 112 aa12.11□□□□□ -0.47
CACNB3-217ENST00000550483 ICE2Q659A1 982 aa12.11□□□□□ -0.47
CACNB3-217ENST00000550483 GALNT18Q6P9A2 607 aa12.11□□□□□ -0.47
CACNB3-217ENST00000550483 PGM2L1Q6PCE3 622 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms