RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 PPP2CBP62714 309 aa20.21■□□□□ 0.83
PRDM4-205ENST00000550376 PPP2CAP67775 309 aa20.21■□□□□ 0.83
PRDM4-205ENST00000550376 PDK3Q15120 406 aa20.21■□□□□ 0.83
PRDM4-205ENST00000550376 RUNDC3AQ59EK9 446 aa20.21■□□□□ 0.83
PRDM4-205ENST00000550376 ERMP1Q7Z2K6 904 aa20.21■□□□□ 0.83
PRDM4-205ENST00000550376 GPR180Q86V85 440 aa20.21■□□□□ 0.83
PRDM4-205ENST00000550376 FAM20CQ8IXL6 584 aa20.21■□□□□ 0.83
PRDM4-205ENST00000550376 PNPT1Q8TCS8 783 aaKnown RBP20.21■□□□□ 0.83
PRDM4-205ENST00000550376 SORBS1Q9BX66 1292 aaKnown RBP20.21■□□□□ 0.83
PRDM4-205ENST00000550376 SGPP1Q9BX95 441 aa20.21■□□□□ 0.83
PRDM4-205ENST00000550376 TEX101Q9BY14 249 aa20.21■□□□□ 0.83
PRDM4-205ENST00000550376 SLC17A9Q9BYT1 436 aa20.21■□□□□ 0.83
PRDM4-205ENST00000550376 XKR8Q9H6D3 395 aa20.21■□□□□ 0.83
PRDM4-205ENST00000550376 CARS2Q9HA77 564 aaKnown RBP20.21■□□□□ 0.83
PRDM4-205ENST00000550376 CCDC177Q9NQR7 707 aaPredicted RBP20.21■□□□□ 0.83
PRDM4-205ENST00000550376 UTS2RQ9UKP6 389 aa20.21■□□□□ 0.83
PRDM4-205ENST00000550376 RNGTTO60942 597 aaKnown RBP20.2■□□□□ 0.82
PRDM4-205ENST00000550376 CPSF4O95639 269 aaKnown RBP20.2■□□□□ 0.82
PRDM4-205ENST00000550376 DNTTP04053 509 aa20.2■□□□□ 0.82
PRDM4-205ENST00000550376 ANXA4P09525 319 aaPredicted RBP20.2■□□□□ 0.82
PRDM4-205ENST00000550376 COX7A2P14406 83 aa20.2■□□□□ 0.82
PRDM4-205ENST00000550376 NELFEP18615 380 aaKnown RBP20.2■□□□□ 0.82
PRDM4-205ENST00000550376 TNFRSF4P43489 277 aa20.2■□□□□ 0.82
PRDM4-205ENST00000550376 CLDN2P57739 230 aa20.2■□□□□ 0.82
PRDM4-205ENST00000550376 METRNLQ641Q3 311 aa20.2■□□□□ 0.82
PRDM4-205ENST00000550376 CKAP5Q14008 2032 aa20.2■□□□□ 0.82
PRDM4-205ENST00000550376 PCM1Q15154 2024 aa20.2■□□□□ 0.82
PRDM4-205ENST00000550376 C15orf38-AP3S2A0A0A6YYH1 394 aa20.2■□□□□ 0.82
PRDM4-205ENST00000550376 GNG14A0A1W2PPG7 69 aa20.2■□□□□ 0.82
PRDM4-205ENST00000550376 PIPSLA2A3N6 862 aa20.2■□□□□ 0.82
PRDM4-205ENST00000550376 AP1G1O43747 822 aa20.2■□□□□ 0.82
PRDM4-205ENST00000550376 C1GALT1C1LP0DN25 315 aa20.2■□□□□ 0.82
PRDM4-205ENST00000550376 IGFBP4P22692 258 aa20.2■□□□□ 0.82
PRDM4-205ENST00000550376 CSTF3Q12996 717 aaKnown RBP20.2■□□□□ 0.82
PRDM4-205ENST00000550376 FAM180BQ6P0A1 224 aa20.2■□□□□ 0.82
PRDM4-205ENST00000550376 ZBTB49Q6ZSB9 765 aa20.2■□□□□ 0.82
PRDM4-205ENST00000550376 ZNF551Q7Z340 670 aaPredicted RBP20.2■□□□□ 0.82
PRDM4-205ENST00000550376 ARPINQ7Z6K5 226 aa20.2■□□□□ 0.82
PRDM4-205ENST00000550376 FBXO30Q8TB52 745 aa20.2■□□□□ 0.82
PRDM4-205ENST00000550376 SLC5A11Q8WWX8 675 aa20.2■□□□□ 0.82
PRDM4-205ENST00000550376 TAC3Q9UHF0 121 aa20.2■□□□□ 0.82
PRDM4-205ENST00000550376 PCDHB3Q9Y5E6 796 aa20.2■□□□□ 0.82
PRDM4-205ENST00000550376 PIAS3Q9Y6X2 628 aa20.2■□□□□ 0.82
PRDM4-205ENST00000550376 TRIOBPQ9H2D6 2365 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 MYO10Q9HD67 2058 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 OR52A4PA6NMU1 304 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 H0Y8X5 98 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 SMNDC1O75940 238 aaKnown RBP eCLIP20.19■□□□□ 0.82
PRDM4-205ENST00000550376 PTPN6P29350 595 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 KIR3DL1P43629 444 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 COL9A2Q14055 689 aaPredicted RBP20.19■□□□□ 0.82
PRDM4-205ENST00000550376 FBXO15Q8NCQ5 510 aaPredicted RBP20.19■□□□□ 0.82
PRDM4-205ENST00000550376 OR8J3Q8NGG0 315 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 WDR48Q8TAF3 677 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 NSMCE2Q96MF7 247 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 UHRF1Q96T88 793 aaPredicted RBP20.19■□□□□ 0.82
PRDM4-205ENST00000550376 CUEDC1Q9NWM3 386 aaPredicted RBP20.19■□□□□ 0.82
PRDM4-205ENST00000550376 LIMD1Q9UGP4 676 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 TMED5Q9Y3A6 229 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 LAMA1P25391 3075 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 MAGEA13PA6NCF6 341 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 RFXANKO14593 260 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 GSTA4O15217 222 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 CAPNS1P04632 268 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 MAPK1P28482 360 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 TRIM23P36406 574 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 ADPRHP54922 357 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 CYP4F2P78329 520 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 SDE2Q6IQ49 451 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 ENPP6Q6UWR7 440 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 ARMCX6Q7L4S7 300 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 EPHX4Q8IUS5 362 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 CBR4Q8N4T8 237 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 TRPV3Q8NET8 790 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 RAD51AP1Q96B01 352 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 SH3KBP1Q96B97 665 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 C11orf24Q96F05 449 aaPredicted RBP20.19■□□□□ 0.82
PRDM4-205ENST00000550376 ANAPC2Q9UJX6 822 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 GPSM3Q9Y4H4 160 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 SPEGQ15772 3267 aa20.19■□□□□ 0.82
PRDM4-205ENST00000550376 GABRR3A8MPY1 467 aa20.18■□□□□ 0.82
PRDM4-205ENST00000550376 PIM1P11309 404 aaPredicted RBP20.18■□□□□ 0.82
PRDM4-205ENST00000550376 CASP9P55211 416 aa20.18■□□□□ 0.82
PRDM4-205ENST00000550376 RPS21P63220 83 aaKnown RBP20.18■□□□□ 0.82
PRDM4-205ENST00000550376 MRPS35P82673 323 aaKnown RBP20.18■□□□□ 0.82
PRDM4-205ENST00000550376 MC1RQ01726 317 aa20.18■□□□□ 0.82
PRDM4-205ENST00000550376 NXPE4Q6UWF7 544 aa20.18■□□□□ 0.82
PRDM4-205ENST00000550376 ZNF621Q6ZSS3 439 aa20.18■□□□□ 0.82
PRDM4-205ENST00000550376 MSLNLQ96KJ4 702 aa20.18■□□□□ 0.82
PRDM4-205ENST00000550376 CHID1Q9BWS9 393 aa20.18■□□□□ 0.82
PRDM4-205ENST00000550376 AGPAT4Q9NRZ5 378 aa20.18■□□□□ 0.82
PRDM4-205ENST00000550376 IMP3Q9NV31 184 aaKnown RBP20.18■□□□□ 0.82
PRDM4-205ENST00000550376 TRBV5-3A0A0A0MS03 114 aa20.18■□□□□ 0.82
PRDM4-205ENST00000550376 FEZF1A0PJY2 475 aa20.18■□□□□ 0.82
PRDM4-205ENST00000550376 POM121BA6NF01 834 aa20.18■□□□□ 0.82
PRDM4-205ENST00000550376 GRXCR2A6NFK2 248 aa20.18■□□□□ 0.82
PRDM4-205ENST00000550376 ASGR2P07307 311 aa20.18■□□□□ 0.82
PRDM4-205ENST00000550376 IGFALSP35858 605 aa20.18■□□□□ 0.82
PRDM4-205ENST00000550376 WNT3P56703 355 aa20.18■□□□□ 0.82
PRDM4-205ENST00000550376 RBBP5Q15291 538 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms