RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 EXOSC8Q96B26 276 aaKnown RBP9.94□□□□□ -0.82
SMARCC2-209ENST00000550164 SLC29A3Q9BZD2 475 aa9.94□□□□□ -0.82
SMARCC2-209ENST00000550164 FAM83DQ9H4H8 585 aa9.94□□□□□ -0.82
SMARCC2-209ENST00000550164 MRPL17Q9NRX2 175 aaKnown RBP9.94□□□□□ -0.82
SMARCC2-209ENST00000550164 INTS6Q9UL03 887 aaKnown RBP9.94□□□□□ -0.82
SMARCC2-209ENST00000550164 ING4Q9UNL4 249 aa9.94□□□□□ -0.82
SMARCC2-209ENST00000550164 ARFGEF1Q9Y6D6 1849 aa9.94□□□□□ -0.82
SMARCC2-209ENST00000550164 MPZL2O60487 215 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 PDYNP01213 254 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 GADD45AP24522 165 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 HSPB3Q12988 150 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 TARDBPQ13148 414 aaKnown RBP eCLIP9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 KCNA10Q16322 511 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 SMN1Q16637 294 aaKnown RBP9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 LCN1P1Q5VSP4 162 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 MED27Q6P2C8 311 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 TUBA3EQ6PEY2 450 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 TBPL2Q6SJ96 375 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 MAMDC4Q6UXC1 1216 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 FGD2Q7Z6J4 655 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 RPL3LQ92901 407 aaKnown RBP9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 NT5C3BQ969T7 300 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 TEX37Q96LM6 180 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 SLC35A5Q9BS91 424 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 MS4A12Q9NXJ0 267 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 CFAP97Q9P2B7 532 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 ZNF282Q9UDV7 671 aaPredicted RBP9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 ERVK-11Q9UQG0 969 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 ZNF510Q9Y2H8 683 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 A0A096LPI6 279 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 SYN3O14994 580 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 SSNA1O43805 119 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 CNMDO75829 334 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 GABRR2P28476 465 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 SDC2P34741 201 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 ZNF45Q02386 682 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 ZNF280BQ86YH2 543 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 AQP11Q8NBQ7 271 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 PSD4Q8NDX1 1056 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 FLCNQ8NFG4 579 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 C9orf43Q8TAL5 461 aaPredicted RBP9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 OSBPL10Q9BXB5 764 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 KRCC1Q9NPI7 259 aaPredicted RBP9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 DNAJC27Q9NZQ0 273 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 NME7Q9Y5B8 376 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 TGFB1P01137 390 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 ADRA1AP35348 466 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 RAET1GQ6H3X3 334 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 NOXRED1Q6NXP6 359 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 CDK20Q8IZL9 346 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 GRPEL2Q8TAA5 225 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 SLC22A4Q9H015 551 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 ANKRA2Q9H9E1 313 aa9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 KIAA1522Q9P206 1035 aaPredicted RBP9.93□□□□□ -0.82
SMARCC2-209ENST00000550164 ISPDA4D126 451 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 CKMT1AP12532 417 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 POLR2EP19388 210 aaKnown RBP9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 NTSP30990 170 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 FCHO2Q0JRZ9 810 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 ARHGEF6Q15052 776 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 TBRG1Q3YBR2 411 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 GPR33Q49SQ1 333 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 ARHGAP15Q53QZ3 475 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 CXorf57Q6NSI4 855 aaKnown RBP9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 DUS1LQ6P1R4 473 aaKnown RBP9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 NFKBIDQ8NI38 313 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 SLC22A17Q8WUG5 538 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 CRELD1Q96HD1 420 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 QRFPRQ96P65 431 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 FEVQ99581 238 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 INPP5KQ9BT40 448 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 C11orf84Q9BUA3 381 aaPredicted RBP9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 ASPNQ9BXN1 380 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 IRF2BPLQ9H1B7 796 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 GPN2Q9H9Y4 310 aaPredicted RBP9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 ARNT2Q9HBZ2 717 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 MRPL39Q9NYK5 338 aaKnown RBP9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 SPATA7Q9P0W8 599 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 ENTPD4Q9Y227 616 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 TRBC2A0A5B9 178 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 WNT9AO14904 365 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 KDELR3O43731 214 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 CDRT1O95170 752 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 CD72P21854 359 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 TCEA1P23193 301 aaKnown RBP9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 PTX3P26022 381 aaPredicted RBP9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 SEMA3BQ13214 749 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 C10orf62Q5T681 223 aaPredicted RBP9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 C11orf88Q6PI97 169 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 C10orf53Q8N6V4 93 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 NUDT8Q8WV74 236 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 TMEM246Q9BRR3 403 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 BOCQ9BWV1 1114 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 ZBTB20Q9HC78 741 aaPredicted RBP9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 GPR83Q9NYM4 423 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 SESN1Q9Y6P5 492 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 NUP214P35658 2090 aaPredicted RBP9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 A0A1W2PQ72 361 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 KIAA0513O60268 411 aa9.92□□□□□ -0.82
SMARCC2-209ENST00000550164 YES1P07947 543 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms