RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 PCDHGA6Q9Y5G7 932 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 SCN8AQ9UQD0 1980 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 M0R082 166 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 BNIP3LO60238 219 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 SPNP16150 400 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 TNFRSF1BP20333 461 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 GTF2E2P29084 291 aaKnown RBP13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 SERPINB1P30740 379 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 GRK5P34947 590 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 OR1D2P34982 312 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 RCVRNP35243 200 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 SLC19A1P41440 591 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 FLT3LGP49771 235 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 NKX2-5P52952 324 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 WNT3P56703 355 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 CRHR2Q13324 411 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 DDX39BQ13838 428 aaKnown RBP13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 STEAP3Q658P3 488 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 CYP2U1Q7Z449 544 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 SYT12Q8IV01 421 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 TBC1D20Q96BZ9 403 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 CMTM7Q96FZ5 175 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 SLC22A12Q96S37 553 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 SYT17Q9BSW7 474 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 CCNB1IP1Q9NPC3 277 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 RPS6KA6Q9UK32 745 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 BTBD3Q9Y2F9 522 aa13.7□□□□□ -0.22
RAPGEF3-218ENST00000548919 LOC100506127A0A0U1RQW1 187 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 NPIPB15A6NHN6 443 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 MAGEB17A8MXT2 336 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 UPK1BO75841 260 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 EPN2O95208 641 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 HMGA1P17096 107 aaKnown RBP13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 PPP3CCP48454 512 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 B4GALNT1Q00973 533 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 BCL2L1Q07817 233 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 PLD1Q13393 1074 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 ZNF404Q494X3 552 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 UTS2BQ765I0 119 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 SLC38A4Q969I6 547 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 SIGLEC11Q96RL6 698 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 CORO1BQ9BR76 489 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 TTPALQ9BTX7 342 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 RETREG1Q9H6L5 497 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 CAB39Q9Y376 341 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 OR51B4Q9Y5P0 310 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 CLDN24A6NM45 220 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 M0R129 80 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 NTRK1P04629 796 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 LAMP1P11279 417 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 COX7A2P14406 83 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 AOAHP28039 575 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 RRM2P31350 389 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 CRISP3P54108 245 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 CDH18Q13634 790 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 LRRC73Q5JTD7 316 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 FAHD1Q6P587 224 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 CBLL1Q75N03 491 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 EIF3MQ7L2H7 374 aaKnown RBP13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 P3H2Q8IVL5 708 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 POC5Q8NA72 575 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 SH3KBP1Q96B97 665 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 CASD1Q96PB1 797 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 MTERF1Q99551 399 aaKnown RBP13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 SIAEQ9HAT2 523 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 KCTD5Q9NXV2 234 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 FAM8A1Q9UBU6 413 aa13.69□□□□□ -0.22
RAPGEF3-218ENST00000548919 SCN2BO60939 215 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 DLGAP3O95886 979 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 GPX2P18283 190 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 SPAM1P38567 509 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 ITGA1P56199 1179 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 CYP4F2P78329 520 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 FADDQ13158 208 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 IQCCQ4KMZ1 466 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 ATP13A5Q4VNC0 1218 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 UBE2UQ5VVX9 321 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 CCDC103Q8IW40 242 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 ELMOD1Q8N336 334 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 OR52J3Q8NH60 311 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 HHIPQ96QV1 700 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 P2RY13Q9BPV8 354 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 KLF16Q9BXK1 252 aaPredicted RBP13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 RUBCNLQ9H714 662 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 TRPM5Q9NZQ8 1165 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 TESMINQ9Y4I5 508 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 KCNK2O95069 426 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 ELNP15502 786 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 AP1S1P61966 158 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 SMAD3P84022 425 aaKnown RBP13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 BOP1Q14137 746 aaKnown RBP13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 TIGD6Q17RP2 521 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 FRG2Q64ET8 278 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 TPGS1Q6ZTW0 290 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 FAM124AQ86V42 546 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 IFNL1Q8IU54 200 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 SCAIQ8N9R8 606 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 IPCEF1Q8WWN9 437 aaPredicted RBP13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 ALG14Q96F25 216 aa13.68□□□□□ -0.22
RAPGEF3-218ENST00000548919 C7orf34Q96L11 122 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms