RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 APPL2Q8NEU8 664 aa3.22□□□□□ -1.89
CCDC38-204ENST00000546816 OR5T2Q8NGG2 359 aa3.22□□□□□ -1.89
CCDC38-204ENST00000546816 NPRL2Q8WTW4 380 aa3.22□□□□□ -1.89
CCDC38-204ENST00000546816 TOMM40LQ969M1 308 aa3.22□□□□□ -1.89
CCDC38-204ENST00000546816 CALML4Q96GE6 196 aa3.22□□□□□ -1.89
CCDC38-204ENST00000546816 RSRC1Q96IZ7 334 aaKnown RBP3.22□□□□□ -1.89
CCDC38-204ENST00000546816 ZNF830Q96NB3 372 aaPredicted RBP3.22□□□□□ -1.89
CCDC38-204ENST00000546816 MTHFD2LQ9H903 347 aaPredicted RBP3.22□□□□□ -1.89
CCDC38-204ENST00000546816 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.22□□□□□ -1.89
CCDC38-204ENST00000546816 OLAHQ9NV23 265 aa3.22□□□□□ -1.89
CCDC38-204ENST00000546816 NSMCE4AQ9NXX6 385 aa3.22□□□□□ -1.89
CCDC38-204ENST00000546816 HAO2Q9NYQ3 351 aa3.22□□□□□ -1.89
CCDC38-204ENST00000546816 CHKBQ9Y259 395 aa3.22□□□□□ -1.89
CCDC38-204ENST00000546816 CASTOR2A6NHX0 329 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 GLOD5A6NK44 160 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 A8MV72 311 aaPredicted RBP3.21□□□□□ -1.9
CCDC38-204ENST00000546816 SHISA9B4DS77 424 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 C2CD4DB7Z1M9 353 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 PTGESO14684 152 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 MELTFP08582 738 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 GP9P14770 177 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 PIK3R1P27986 724 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 OXTRP30559 389 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 ZNF75DP51815 510 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 TRIM29Q14134 588 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 RNF212Q495C1 297 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 GARNL3Q5VVW2 1013 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 OR4A47Q6IF82 309 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 LCLAT1Q6UWP7 414 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 ZNF841Q6ZN19 808 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 BRINP3Q76B58 766 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 CHMP1BQ7LBR1 199 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 ZER1Q7Z7L7 766 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 PHC2Q8IXK0 858 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 FAM89BQ8N5H3 189 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 ATL1Q8WXF7 558 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 SDF4Q9BRK5 362 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 POLR3GLQ9BT43 218 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 PANK2Q9BZ23 570 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 PRDM4Q9UKN5 801 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 PA2G4Q9UQ80 394 aaKnown RBP3.21□□□□□ -1.9
CCDC38-204ENST00000546816 RPS6KL1Q9Y6S9 549 aa3.21□□□□□ -1.9
CCDC38-204ENST00000546816 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.2□□□□□ -1.9
CCDC38-204ENST00000546816 TRBV4-1A0A0J9YWV2 114 aa3.2□□□□□ -1.9
CCDC38-204ENST00000546816 TRIM77I1YAP6 450 aa3.2□□□□□ -1.9
CCDC38-204ENST00000546816 K7EQD1 137 aa3.2□□□□□ -1.9
CCDC38-204ENST00000546816 TLX2O43763 284 aaPredicted RBP3.2□□□□□ -1.9
CCDC38-204ENST00000546816 GALR3O60755 368 aaPredicted RBP3.2□□□□□ -1.9
CCDC38-204ENST00000546816 LRCH4O75427 683 aa3.2□□□□□ -1.9
CCDC38-204ENST00000546816 NXPH4O95158 308 aa3.2□□□□□ -1.9
CCDC38-204ENST00000546816 EIF2DP41214 584 aaKnown RBP3.2□□□□□ -1.9
CCDC38-204ENST00000546816 CASP2P42575 452 aa3.2□□□□□ -1.9
CCDC38-204ENST00000546816 LHX1P48742 406 aa3.2□□□□□ -1.9
CCDC38-204ENST00000546816 CLDN15P56746 228 aa3.2□□□□□ -1.9
CCDC38-204ENST00000546816 DHODHQ02127 395 aa3.2□□□□□ -1.9
CCDC38-204ENST00000546816 TRAP1Q12931 704 aaKnown RBP3.2□□□□□ -1.9
CCDC38-204ENST00000546816 STK4Q13043 487 aa3.2□□□□□ -1.9
CCDC38-204ENST00000546816 SRSF9Q13242 221 aaKnown RBP eCLIP3.2□□□□□ -1.9
CCDC38-204ENST00000546816 ZNF177Q13360 481 aaPredicted RBP3.2□□□□□ -1.9
CCDC38-204ENST00000546816 RILPL1Q5EBL4 403 aa3.2□□□□□ -1.9
CCDC38-204ENST00000546816 SPECC1Q5M775 1068 aa3.2□□□□□ -1.9
CCDC38-204ENST00000546816 SPATA1Q5VX52 437 aa3.2□□□□□ -1.9
CCDC38-204ENST00000546816 MZT2BQ6NZ67 158 aa3.2□□□□□ -1.9
CCDC38-204ENST00000546816 CEACAM19Q7Z692 300 aa3.2□□□□□ -1.9
CCDC38-204ENST00000546816 SLC25A42Q86VD7 318 aa3.2□□□□□ -1.9
CCDC38-204ENST00000546816 PIK3R3Q92569 461 aa3.2□□□□□ -1.9
CCDC38-204ENST00000546816 GPR88Q9GZN0 384 aa3.2□□□□□ -1.9
CCDC38-204ENST00000546816 UBA5Q9GZZ9 404 aa3.2□□□□□ -1.9
CCDC38-204ENST00000546816 MAF1Q9H063 256 aa3.2□□□□□ -1.9
CCDC38-204ENST00000546816 GPN1Q9HCN4 374 aaPredicted RBP3.2□□□□□ -1.9
CCDC38-204ENST00000546816 TSPAN16Q9UKR8 245 aa3.2□□□□□ -1.9
CCDC38-204ENST00000546816 PCDHGB4Q9UN71 923 aa3.2□□□□□ -1.9
CCDC38-204ENST00000546816 STYXL1Q9Y6J8 313 aa3.2□□□□□ -1.9
CCDC38-204ENST00000546816 CCL24O00175 119 aa3.19□□□□□ -1.9
CCDC38-204ENST00000546816 SH3BP5O60239 455 aa3.19□□□□□ -1.9
CCDC38-204ENST00000546816 WDHD1O75717 1129 aaPredicted RBP3.19□□□□□ -1.9
CCDC38-204ENST00000546816 PGM3O95394 542 aa3.19□□□□□ -1.9
CCDC38-204ENST00000546816 MYOGP15173 224 aa3.19□□□□□ -1.9
CCDC38-204ENST00000546816 POLR2LP62875 67 aaKnown RBP3.19□□□□□ -1.9
CCDC38-204ENST00000546816 SGCGQ13326 291 aa3.19□□□□□ -1.9
CCDC38-204ENST00000546816 CUL3Q13618 768 aa3.19□□□□□ -1.9
CCDC38-204ENST00000546816 CUL4AQ13619 759 aa3.19□□□□□ -1.9
CCDC38-204ENST00000546816 SIM2Q14190 667 aaPredicted RBP3.19□□□□□ -1.9
CCDC38-204ENST00000546816 MS4A18Q3C1V0 323 aa3.19□□□□□ -1.9
CCDC38-204ENST00000546816 C3P1Q6ZMU1 363 aa3.19□□□□□ -1.9
CCDC38-204ENST00000546816 CDHR3Q6ZTQ4 885 aa3.19□□□□□ -1.9
CCDC38-204ENST00000546816 FCRLAQ7L513 359 aa3.19□□□□□ -1.9
CCDC38-204ENST00000546816 TIPARPQ7Z3E1 657 aaKnown RBP3.19□□□□□ -1.9
CCDC38-204ENST00000546816 TSPAN14Q8NG11 270 aa3.19□□□□□ -1.9
CCDC38-204ENST00000546816 JAKMIP2Q96AA8 810 aa3.19□□□□□ -1.9
CCDC38-204ENST00000546816 MOB3AQ96BX8 217 aa3.19□□□□□ -1.9
CCDC38-204ENST00000546816 ZNF597Q96LX8 424 aa3.19□□□□□ -1.9
CCDC38-204ENST00000546816 ABHD1Q96SE0 405 aa3.19□□□□□ -1.9
CCDC38-204ENST00000546816 FEVQ99581 238 aa3.19□□□□□ -1.9
CCDC38-204ENST00000546816 CHCHD5Q9BSY4 110 aa3.19□□□□□ -1.9
CCDC38-204ENST00000546816 SLC2A11Q9BYW1 496 aa3.19□□□□□ -1.9
CCDC38-204ENST00000546816 EGLN3Q9H6Z9 239 aa3.19□□□□□ -1.9
CCDC38-204ENST00000546816 ANKZF1Q9H8Y5 726 aa3.19□□□□□ -1.9
CCDC38-204ENST00000546816 MRPL15Q9P015 296 aaKnown RBP3.19□□□□□ -1.9
CCDC38-204ENST00000546816 DDX25Q9UHL0 483 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms