RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 AMD1P17707 334 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 ENGP17813 658 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 PPIBP23284 216 aaKnown RBP8.48□□□□□ -1.05
TDP1-204ENST00000545686 GADD45AP24522 165 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 TACR1P25103 407 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 CASP3P42574 277 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 LIMK1P53667 647 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 RHOAP61586 193 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 ARHGEF7Q14155 803 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 EIF4HQ15056 248 aaKnown RBP8.48□□□□□ -1.05
TDP1-204ENST00000545686 PTPRRQ15256 657 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 IQCCQ4KMZ1 466 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 OR4F3Q6IEY1 312 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 VTCN1Q7Z7D3 282 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 DENND1CQ8IV53 801 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 SYNPOQ8N3V7 929 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 PAF1Q8N7H5 531 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 OR8J2Q8NGG1 315 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 C9orf43Q8TAL5 461 aaPredicted RBP8.48□□□□□ -1.05
TDP1-204ENST00000545686 PIH1D2Q8WWB5 315 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 C7orf34Q96L11 122 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 B3GALT6Q96L58 329 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 FAM193BQ96PV7 902 aaPredicted RBP8.48□□□□□ -1.05
TDP1-204ENST00000545686 PANX1Q96RD7 426 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 CDADC1Q9BWV3 514 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 REXO4Q9GZR2 422 aaKnown RBP8.48□□□□□ -1.05
TDP1-204ENST00000545686 C6orf62Q9GZU0 229 aaPredicted RBP8.48□□□□□ -1.05
TDP1-204ENST00000545686 CRISPLD1Q9H336 500 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 ZFYVE1Q9HBF4 777 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 SIRT5Q9NXA8 310 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 POU2F3Q9UKI9 436 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 PCDHGA3Q9Y5H0 932 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 KIF26AQ9ULI4 1882 aaPredicted RBP8.48□□□□□ -1.05
TDP1-204ENST00000545686 DIRAS1O95057 198 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 PRAMEF12O95522 483 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 TGFBR1P36897 503 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 HNMTP50135 292 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 SGSHP51688 502 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 PTPN5P54829 565 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 SYT16Q17RD7 645 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 ADGRF1Q5T601 910 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 SLC24A5Q71RS6 500 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 MMAAQ8IVH4 418 aaKnown RBP8.48□□□□□ -1.05
TDP1-204ENST00000545686 DEPDC4Q8N2C3 294 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 CBARPQ8N350 705 aaPredicted RBP8.48□□□□□ -1.05
TDP1-204ENST00000545686 TRPV1Q8NER1 839 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 CRELD1Q96HD1 420 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 METTL2AQ96IZ6 378 aaKnown RBP8.48□□□□□ -1.05
TDP1-204ENST00000545686 COL21A1Q96P44 957 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 CCDC32Q9BV29 185 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 ADPRHL2Q9NX46 363 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 SPASTQ9UBP0 616 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 CRLS1Q9UJA2 301 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.48□□□□□ -1.05
TDP1-204ENST00000545686 MAPRE3Q9UPY8 281 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 NOD1Q9Y239 953 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 KLK4Q9Y5K2 254 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 OBSL1O75147 1896 aa8.48□□□□□ -1.05
TDP1-204ENST00000545686 GLYATL1P3A0A0U1RQE8 302 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.47□□□□□ -1.05
TDP1-204ENST00000545686 AGAP14A8MT82 685 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 LOC110117498-PIK3R3F6TDL0 507 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 DSCR3O14972 297 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 ADAMDEC1O15204 470 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 SCN2BO60939 215 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 STC2O76061 302 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 TRBC1P01850 177 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 C8GP07360 202 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 ABCB1P08183 1280 aaPredicted RBP8.47□□□□□ -1.05
TDP1-204ENST00000545686 CORO1AP31146 461 aaKnown RBP8.47□□□□□ -1.05
TDP1-204ENST00000545686 PCGF2P35227 344 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 NSG1P42857 185 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 SLC6A12P48065 614 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 RPIAP49247 311 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 WNT3P56703 355 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 CSTF3Q12996 717 aaKnown RBP8.47□□□□□ -1.05
TDP1-204ENST00000545686 TRIM71Q2Q1W2 868 aaKnown RBP8.47□□□□□ -1.05
TDP1-204ENST00000545686 TIMM50Q3ZCQ8 353 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 PRSS36Q5K4E3 855 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 NOXRED1Q6NXP6 359 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 RNF19BQ6ZMZ0 732 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 MBOAT1Q6ZNC8 495 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 ZNF367Q7RTV3 350 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 NXPE1Q8N323 547 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 PARP16Q8N5Y8 322 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 CLDN19Q8N6F1 224 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 DENND6BQ8NEG7 585 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 ZNF675Q8TD23 568 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 ATL1Q8WXF7 558 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 PIK3R3Q92569 461 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 MTFMTQ96DP5 389 aaKnown RBP8.47□□□□□ -1.05
TDP1-204ENST00000545686 ZNF486Q96H40 463 aaPredicted RBP8.47□□□□□ -1.05
TDP1-204ENST00000545686 CLSTN3Q9BQT9 956 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 CHST8Q9H2A9 424 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 IL26Q9NPH9 171 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 ARL15Q9NXU5 204 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 SPATA7Q9P0W8 599 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 POFUT2Q9Y2G5 429 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 PCDHB11Q9Y5F2 797 aa8.47□□□□□ -1.05
TDP1-204ENST00000545686 A0A0U1RQS6 177 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms