RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 TBL1XR1Q9BZK7 514 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 HAPLN2Q9GZV7 340 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 HCN3Q9P1Z3 774 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 DAPL1A0PJW8 107 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 GRID2O43424 1007 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 H6PDO95479 791 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 PTNP21246 168 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 XKP51811 444 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 CDH15P55291 814 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 LMAN2Q12907 356 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 TLR1Q15399 786 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 DUOXA1Q1HG43 343 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 C5orf22Q49AR2 442 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 TMA7Q9Y2S6 64 aaKnown RBP12.45□□□□□ -0.42
CHD4-211ENST00000544484 PRODHO43272 600 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 PAPSS2O95340 614 aaPredicted RBP12.45□□□□□ -0.42
CHD4-211ENST00000544484 ANXA8P13928 327 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 PCSK2P16519 638 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 HNF1BP35680 557 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 ABATP80404 500 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 OC90Q02509 493 aaPredicted RBP12.45□□□□□ -0.42
CHD4-211ENST00000544484 LAPTM4AQ15012 233 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 IQCCQ4KMZ1 466 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 ZNF678Q5SXM1 525 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 MLIPQ5VWP3 458 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 DPY19L3Q6ZPD9 716 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 TP53INP2Q8IXH6 220 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 GTPBP2Q9BX10 602 aaKnown RBP12.45□□□□□ -0.42
CHD4-211ENST00000544484 BHLHE41Q9C0J9 482 aaPredicted RBP12.45□□□□□ -0.42
CHD4-211ENST00000544484 ZBTB26Q9HCK0 441 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 ING3Q9NXR8 418 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 GMPRP36959 345 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 NUDT6P53370 316 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 SLC18A1P54219 525 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 ID2Q02363 134 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 PJA1Q8NG27 643 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 SLC5A11Q8WWX8 675 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 PKP2Q99959 881 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 KAT8Q9H7Z6 458 aaKnown RBP12.45□□□□□ -0.42
CHD4-211ENST00000544484 VRTNQ9H8Y1 702 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 MKKSQ9NPJ1 570 aaPredicted RBP12.45□□□□□ -0.42
CHD4-211ENST00000544484 FAUP35544 74 aaKnown RBP12.45□□□□□ -0.42
CHD4-211ENST00000544484 CDK6Q00534 326 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 ZNF33AQ06730 810 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 CAMKVQ8NCB2 501 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 NSUN5Q96P11 429 aaKnown RBP12.45□□□□□ -0.42
CHD4-211ENST00000544484 DGAT2Q96PD7 388 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 XKR8Q9H6D3 395 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 BRD7Q9NPI1 651 aa12.45□□□□□ -0.42
CHD4-211ENST00000544484 RFPL1O75677 317 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 CH25HO95992 272 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 STARP49675 285 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 ZCCHC12Q6PEW1 402 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 MRGPRX2Q96LB1 330 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 SLC29A3Q9BZD2 475 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 CD244Q9BZW8 370 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 TRPV5Q9NQA5 729 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 TRNAU1APQ9NX07 287 aaKnown RBP12.44□□□□□ -0.42
CHD4-211ENST00000544484 MAN2B2Q9Y2E5 1009 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 ZNF142P52746 1687 aaPredicted RBP12.44□□□□□ -0.42
CHD4-211ENST00000544484 KLF11O14901 512 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 PCDHGA12O60330 932 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 ONECUT3O60422 494 aaPredicted RBP12.44□□□□□ -0.42
CHD4-211ENST00000544484 DIO3P55073 304 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 PHF19Q5T6S3 580 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 TIFABQ6ZNK6 161 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 OR4K1Q8NGD4 311 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 LMX1AQ8TE12 382 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 SORCS1Q8WY21 1168 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 C1orf74Q96LT6 269 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 GFM1Q96RP9 751 aaKnown RBP12.44□□□□□ -0.42
CHD4-211ENST00000544484 FIZ1Q96SL8 496 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 TPT1P8Q9HAU6 139 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 COMMD3Q9UBI1 195 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 H0YGN5 161 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 KMOO15229 486 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 PRKACGP22612 351 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 EDNRBP24530 442 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 ITGA3P26006 1051 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 TXNL4AP83876 142 aaKnown RBP12.44□□□□□ -0.42
CHD4-211ENST00000544484 RTP2Q5QGT7 225 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 AKAP14Q86UN6 197 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 KBTBD7Q8WVZ9 684 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 NCSTNQ92542 709 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 C1QTNF1Q9BXJ1 281 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 RNF186Q9NXI6 227 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 SPIN1Q9Y657 262 aaPredicted RBP12.44□□□□□ -0.42
CHD4-211ENST00000544484 NFS1Q9Y697 457 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 ZNF99A8MXY4 864 aaPredicted RBP12.44□□□□□ -0.42
CHD4-211ENST00000544484 KHNYNO15037 678 aaKnown RBP12.44□□□□□ -0.42
CHD4-211ENST00000544484 CBFA2T3O75081 653 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 OAS1P00973 400 aaKnown RBP12.44□□□□□ -0.42
CHD4-211ENST00000544484 EBLN1P0CF75 366 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 HOXA11P31270 313 aaPredicted RBP12.44□□□□□ -0.42
CHD4-211ENST00000544484 VLDLRP98155 873 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 CHERPQ8IWX8 916 aaKnown RBP12.44□□□□□ -0.42
CHD4-211ENST00000544484 OR5M3Q8NGP4 307 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 KCNJ9Q92806 393 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 ZFP3Q96NJ6 502 aa12.44□□□□□ -0.42
CHD4-211ENST00000544484 SLC2A13Q96QE2 648 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms