RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 MT-ND1P03886 318 aa16.48■□□□□ 0.23
PTPRO-209ENST00000543886 SOX9P48436 509 aa16.48■□□□□ 0.23
PTPRO-209ENST00000543886 SEC13P55735 322 aa16.48■□□□□ 0.23
PTPRO-209ENST00000543886 E2F2Q14209 437 aa16.48■□□□□ 0.23
PTPRO-209ENST00000543886 SLBPQ14493 270 aaKnown RBP eCLIP16.48■□□□□ 0.23
PTPRO-209ENST00000543886 HIST2H2ACQ16777 129 aaPredicted RBP16.48■□□□□ 0.23
PTPRO-209ENST00000543886 WSCD2Q2TBF2 565 aa16.48■□□□□ 0.23
PTPRO-209ENST00000543886 CATSPEREQ5SY80 951 aa16.48■□□□□ 0.23
PTPRO-209ENST00000543886 C10orf62Q5T681 223 aaPredicted RBP16.48■□□□□ 0.23
PTPRO-209ENST00000543886 HIST2H2AA3Q6FI13 130 aa16.48■□□□□ 0.23
PTPRO-209ENST00000543886 ADNP2Q6IQ32 1131 aa16.48■□□□□ 0.23
PTPRO-209ENST00000543886 MICU2Q8IYU8 434 aa16.48■□□□□ 0.23
PTPRO-209ENST00000543886 C1orf52Q8N6N3 182 aaKnown RBP16.48■□□□□ 0.23
PTPRO-209ENST00000543886 OR7A2PQ8NGA2 310 aa16.48■□□□□ 0.23
PTPRO-209ENST00000543886 FAM162AQ96A26 154 aa16.48■□□□□ 0.23
PTPRO-209ENST00000543886 AURKBQ96GD4 344 aaPredicted RBP16.48■□□□□ 0.23
PTPRO-209ENST00000543886 REXO4Q9GZR2 422 aaKnown RBP16.48■□□□□ 0.23
PTPRO-209ENST00000543886 PCYT1BQ9Y5K3 369 aaPredicted RBP16.48■□□□□ 0.23
PTPRO-209ENST00000543886 A0A1W2PP55 124 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 PDLIM1O00151 329 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 CXCR6O00574 342 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 SH3BGRLO75368 114 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 SCELO95171 688 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 ETHE1O95571 254 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 C1GALT1C1LP0DN25 315 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 RAP2AP10114 183 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 ASMTP46597 345 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 CLCN2P51788 898 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 HNRNPFP52597 415 aaKnown RBP16.47■□□□□ 0.23
PTPRO-209ENST00000543886 RPS13P62277 151 aaKnown RBP16.47■□□□□ 0.23
PTPRO-209ENST00000543886 TAP2Q03519 686 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 CHRNB3Q05901 458 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 GK3PQ14409 553 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 DUOXA1Q1HG43 343 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 RNF220Q5VTB9 566 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 CHERPQ8IWX8 916 aaKnown RBP16.47■□□□□ 0.23
PTPRO-209ENST00000543886 GPR156Q8NFN8 814 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 SLC5A11Q8WWX8 675 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 NCLNQ969V3 563 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 RAD51AP1Q96B01 352 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 WDR34Q96EX3 536 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 VPS50Q96JG6 964 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 RPP25Q9BUL9 199 aaKnown RBP16.47■□□□□ 0.23
PTPRO-209ENST00000543886 BDH2Q9BUT1 245 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 UGT2B28Q9BY64 529 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 EHD1Q9H4M9 534 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 LIMD1Q9UGP4 676 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 ADGRE2Q9UHX3 823 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 MAPRE3Q9UPY8 281 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 SH2B3Q9UQQ2 575 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 C5orf42Q9H799 3197 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 B3GALT4O96024 378 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 ANXA4P09525 319 aaPredicted RBP16.47■□□□□ 0.23
PTPRO-209ENST00000543886 KELP23276 732 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 TIE1P35590 1138 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 CDKN2CP42773 168 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 TRPC1P48995 793 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 C21orf58P58505 322 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 SF1Q15637 639 aaKnown RBP16.47■□□□□ 0.23
PTPRO-209ENST00000543886 UGT8Q16880 541 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 ZNF776Q68DI1 518 aaPredicted RBP16.47■□□□□ 0.23
PTPRO-209ENST00000543886 DCUN1D3Q8IWE4 304 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 LMNTD1Q8N9Z9 388 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 PANX1Q96RD7 426 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 LGR4Q9BXB1 951 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 FAM120CQ9NX05 1096 aaKnown RBP16.47■□□□□ 0.23
PTPRO-209ENST00000543886 SERGEFQ9UGK8 458 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 PCDHGB4Q9UN71 923 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 PCDHGB5Q9Y5G0 923 aa16.47■□□□□ 0.23
PTPRO-209ENST00000543886 CKAP5Q14008 2032 aa16.46■□□□□ 0.23
PTPRO-209ENST00000543886 PIPSLA2A3N6 862 aa16.46■□□□□ 0.23
PTPRO-209ENST00000543886 FPGTO14772 594 aa16.46■□□□□ 0.23
PTPRO-209ENST00000543886 PI15O43692 258 aa16.46■□□□□ 0.23
PTPRO-209ENST00000543886 RASAL1O95294 804 aa16.46■□□□□ 0.23
PTPRO-209ENST00000543886 RPN2P04844 631 aa16.46■□□□□ 0.23
PTPRO-209ENST00000543886 HOXB9P17482 250 aaPredicted RBP16.46■□□□□ 0.23
PTPRO-209ENST00000543886 PTPN6P29350 595 aa16.46■□□□□ 0.23
PTPRO-209ENST00000543886 HPCAL1P37235 193 aa16.46■□□□□ 0.23
PTPRO-209ENST00000543886 TNFRSF4P43489 277 aa16.46■□□□□ 0.23
PTPRO-209ENST00000543886 GALK1P51570 392 aa16.46■□□□□ 0.23
PTPRO-209ENST00000543886 TXNL4AP83876 142 aaKnown RBP16.46■□□□□ 0.23
PTPRO-209ENST00000543886 LAPTM5Q13571 262 aa16.46■□□□□ 0.23
PTPRO-209ENST00000543886 SPRED1Q7Z699 444 aa16.46■□□□□ 0.23
PTPRO-209ENST00000543886 CALHM3Q86XJ0 350 aa16.46■□□□□ 0.23
PTPRO-209ENST00000543886 LRRC56Q8IYG6 542 aaPredicted RBP16.46■□□□□ 0.23
PTPRO-209ENST00000543886 MFSD2AQ8NA29 543 aa16.46■□□□□ 0.23
PTPRO-209ENST00000543886 PHC3Q8NDX5 983 aa16.46■□□□□ 0.23
PTPRO-209ENST00000543886 OR5AR1Q8NGP9 310 aa16.46■□□□□ 0.23
PTPRO-209ENST00000543886 FBXO30Q8TB52 745 aa16.46■□□□□ 0.23
PTPRO-209ENST00000543886 GANCQ8TET4 914 aa16.46■□□□□ 0.23
PTPRO-209ENST00000543886 CHTF18Q8WVB6 975 aa16.46■□□□□ 0.23
PTPRO-209ENST00000543886 TFGQ92734 400 aaPredicted RBP16.46■□□□□ 0.23
PTPRO-209ENST00000543886 C11orf24Q96F05 449 aaPredicted RBP16.46■□□□□ 0.23
PTPRO-209ENST00000543886 TRIM4Q9C037 500 aa16.46■□□□□ 0.23
PTPRO-209ENST00000543886 WDR26Q9H7D7 661 aa16.46■□□□□ 0.23
PTPRO-209ENST00000543886 SLC23A2Q9UGH3 650 aa16.46■□□□□ 0.23
PTPRO-209ENST00000543886 TDRKHQ9Y2W6 561 aaKnown RBP16.46■□□□□ 0.23
PTPRO-209ENST00000543886 GNG14A0A1W2PPG7 69 aa16.46■□□□□ 0.22
PTPRO-209ENST00000543886 EVPLLA8MZ36 301 aa16.46■□□□□ 0.22
PTPRO-209ENST00000543886 SCAMP2O15127 329 aaKnown RBP16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms