RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 HEBP2Q9Y5Z4 205 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 KCNE2Q9Y6J6 123 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 AHCTF1Q8WYP5 2266 aa11.12□□□□□ -0.63
COPS7A-217ENST00000543537 ZNF106Q9H2Y7 1883 aaKnown RBP11.11□□□□□ -0.63
COPS7A-217ENST00000543537 CDRT15L2A8MXV6 281 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 NPIPB8E9PQR5 432 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 PSMD12O00232 456 aaPredicted RBP11.11□□□□□ -0.63
COPS7A-217ENST00000543537 RRP8O43159 456 aaKnown RBP11.11□□□□□ -0.63
COPS7A-217ENST00000543537 NUDT21O43809 227 aaKnown RBP11.11□□□□□ -0.63
COPS7A-217ENST00000543537 POP7O75817 140 aaKnown RBP11.11□□□□□ -0.63
COPS7A-217ENST00000543537 CIB2O75838 187 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 WFS1O76024 890 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 FUCA1P04066 466 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 ITGB6P18564 788 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 NDUFS1P28331 727 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 EPHA3P29320 983 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 SERPINB1P30740 379 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 CCKBRP32239 447 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 CDH13P55290 713 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 GABREP78334 506 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 EIF3IQ13347 325 aaKnown RBP11.11□□□□□ -0.63
COPS7A-217ENST00000543537 PDCD2Q16342 344 aaPredicted RBP11.11□□□□□ -0.63
COPS7A-217ENST00000543537 SLC9B1Q4ZJI4 515 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 PAGE2BQ5JRK9 111 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 PRMT9Q6P2P2 845 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 C19orf48Q6RUI8 117 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 HACD2Q6Y1H2 254 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 MAVSQ7Z434 540 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 TRIM46Q7Z4K8 759 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 HEATR4Q86WZ0 1026 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 DDIASQ8IXT1 998 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 MIER2Q8N344 545 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 L3MBTL4Q8NA19 623 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 GLB1L3Q8NCI6 653 aaPredicted RBP11.11□□□□□ -0.63
COPS7A-217ENST00000543537 ZNF248Q8NDW4 579 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 STARD8Q92502 1023 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 ROPN1LQ96C74 230 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 SLC7A6OSQ96CW6 309 aaPredicted RBP11.11□□□□□ -0.63
COPS7A-217ENST00000543537 SLC46A1Q96NT5 459 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 HAUS8Q9BT25 410 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 TBC1D10AQ9BXI6 508 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 EHD1Q9H4M9 534 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 PRORYQ9H606 182 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 NOL11Q9H8H0 719 aaKnown RBP11.11□□□□□ -0.63
COPS7A-217ENST00000543537 SEMA4BQ9NPR2 832 aaPredicted RBP11.11□□□□□ -0.63
COPS7A-217ENST00000543537 TAS2R1Q9NYW7 299 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 RALYQ9UKM9 306 aaKnown RBP11.11□□□□□ -0.63
COPS7A-217ENST00000543537 AP3M1Q9Y2T2 418 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 NDUFAF1Q9Y375 327 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 FASNP49327 2511 aaKnown RBP11.11□□□□□ -0.63
COPS7A-217ENST00000543537 NBEAQ8NFP9 2946 aa11.11□□□□□ -0.63
COPS7A-217ENST00000543537 A0A0U1RQS6 177 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 NCF1BA6NI72 391 aaPredicted RBP11.1□□□□□ -0.63
COPS7A-217ENST00000543537 NCF1CA8MVU1 366 aaPredicted RBP11.1□□□□□ -0.63
COPS7A-217ENST00000543537 D6RAR5 112 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 E9PBE3 544 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 TMX2-CTNND1H3BSU7 103 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 CLGNO14967 610 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 GSC2O15499 205 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 SGTAO43765 313 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 MGRN1O60291 552 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 CCNT2O60583 730 aaKnown RBP11.1□□□□□ -0.63
COPS7A-217ENST00000543537 KLHL41O60662 606 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 RASSF9O75901 435 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 SIX3O95343 332 aaPredicted RBP11.1□□□□□ -0.63
COPS7A-217ENST00000543537 CBX6O95503 412 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 COX4I1P13073 169 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 NCF1P14598 390 aaPredicted RBP11.1□□□□□ -0.63
COPS7A-217ENST00000543537 DDX5P17844 614 aaKnown RBP11.1□□□□□ -0.63
COPS7A-217ENST00000543537 GNAZP19086 355 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 CXCR2P25025 360 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 PGM1P36871 562 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 GMPRP36959 345 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 ARL1P40616 181 aaPredicted RBP11.1□□□□□ -0.63
COPS7A-217ENST00000543537 CASP2P42575 452 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 SLC6A12P48065 614 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 CLCNKAP51800 687 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 RAP1GDS1P52306 607 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 PCBP4P57723 403 aaKnown RBP11.1□□□□□ -0.63
COPS7A-217ENST00000543537 ERVK-8P63133 956 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 PHEXP78562 749 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 TLE3Q04726 772 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 EMX2Q04743 252 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 SF3A3Q12874 501 aaKnown RBP eCLIP11.1□□□□□ -0.63
COPS7A-217ENST00000543537 ART3Q13508 389 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 LRP8Q14114 963 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 SPIDRQ14159 915 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 CLPPQ16740 277 aaPredicted RBP11.1□□□□□ -0.63
COPS7A-217ENST00000543537 HIST2H2ACQ16777 129 aaPredicted RBP11.1□□□□□ -0.63
COPS7A-217ENST00000543537 C14orf28Q4W4Y0 310 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 HIST2H2AA3Q6FI13 130 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 CAPN13Q6MZZ7 669 aaPredicted RBP11.1□□□□□ -0.63
COPS7A-217ENST00000543537 LRRC69Q6ZNQ3 347 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 RFLNAQ6ZTI6 216 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 DET1Q7L5Y6 550 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 RD3Q7Z3Z2 195 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 ZNF438Q7Z4V0 828 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 GOLGA7Q7Z5G4 137 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 TAF8Q7Z7C8 310 aa11.1□□□□□ -0.63
COPS7A-217ENST00000543537 NRROSQ86YC3 692 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms