RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 SLC38A8A6NNN8 435 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 SLC28A1O00337 649 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 TBL1XO60907 577 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 STC2O76061 302 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 CLDN9O95484 217 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 HOXB9P17482 250 aaPredicted RBP10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 JUNDP17535 347 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 KDELR2P33947 212 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 ATP5C1P36542 298 aaKnown RBP10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 RACK1P63244 317 aaKnown RBP10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 DSC1Q08554 894 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 UGT8Q16880 541 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 PTCHD3Q3KNS1 767 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 ZMAT1Q5H9K5 638 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 TPRG1LQ5T0D9 272 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 TRIM46Q7Z4K8 759 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 TSEN54Q7Z6J9 526 aaKnown RBP10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 METTL4Q8N3J2 472 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 TCAIMQ8N3R3 496 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 SPPL2AQ8TCT8 520 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 BCL7CQ8WUZ0 217 aaPredicted RBP10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 TRIB2Q92519 343 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 ITPKCQ96DU7 683 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 OR5M11Q96RB7 305 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 NIPSNAP1Q9BPW8 284 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 KCNH6Q9H252 994 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 ACSL6Q9UKU0 697 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 RIMKLBQ9ULI2 386 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 RFPL2O75678 378 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 ZNF7P17097 686 aaPredicted RBP10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 CCR7P32248 378 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 HNF1BP35680 557 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 MAGEA2P43356 314 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 SLC11A2P49281 568 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 CDH4P55283 916 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 GAB1Q13480 694 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 VMACQ2NL98 169 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 CCBE1Q6UXH8 406 aaPredicted RBP10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 GDPD3Q7L5L3 318 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 FAM124AQ86V42 546 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 P3H2Q8IVL5 708 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 AADATQ8N5Z0 425 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 SETD9Q8NE22 299 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 USP7Q93009 1102 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 ZNF566Q969W8 418 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 MYO19Q96H55 970 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 FUBP3Q96I24 572 aaKnown RBP eCLIP10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 NEDD4LQ96PU5 975 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 APOL4Q9BPW4 351 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 CLSTN3Q9BQT9 956 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 REEP1Q9H902 201 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 ZFYVE1Q9HBF4 777 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 PCDHGB1Q9Y5G3 927 aa10.04□□□□□ -0.8
CDC42SE1-207ENST00000540998 PABPN1LA6NDY0 278 aaKnown RBP10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 GRXCR2A6NFK2 248 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 AGAP5A6NIR3 686 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 METTL15A6NJ78 407 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 H3BM21 787 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 PCDH7O60245 1069 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 ERN1O75460 977 aaKnown RBP10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 DNAJA1P31689 397 aaKnown RBP10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 HMGCLP35914 325 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 CSKP41240 450 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 KIR3DL1P43629 444 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 RGS4P49798 205 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 CLDN8P56748 225 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 BCL2A1Q16548 175 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 LRIF1Q5T3J3 769 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 GPRC6AQ5T6X5 926 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 DEPDC1Q5TB30 811 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 UBE2J2Q8N2K1 259 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 SLC5A8Q8N695 610 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 GPR26Q8NDV2 337 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 GTPBP3Q969Y2 492 aaKnown RBP10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 SH3GL1Q99961 368 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 ITPAQ9BY32 194 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 TPK1Q9H3S4 243 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 TM9SF3Q9HD45 589 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 DNMT3LQ9UJW3 386 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 VPS9D1Q9Y2B5 631 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 DOCK6Q96HP0 2047 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 NDUFB5O43674 189 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 DUSP11O75319 330 aaKnown RBP10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 ETHE1O95571 254 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 COX7A2P14406 83 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 CD22P20273 847 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 FPR1P21462 350 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 CCND3P30281 292 aaPredicted RBP10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 ARHGDIAP52565 204 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 WNT3P56703 355 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 ABHD18Q0P651 414 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 IRF3Q14653 427 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 GANABQ14697 944 aaKnown RBP10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 COX20Q5RI15 118 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 NOXRED1Q6NXP6 359 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 SYT12Q8IV01 421 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 CYP4Z2PQ8N1L4 340 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 OR4K1Q8NGD4 311 aa10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 VANGL1Q8TAA9 524 aaPredicted RBP10.03□□□□□ -0.8
CDC42SE1-207ENST00000540998 PIH1D2Q8WWB5 315 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms