RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 OR52K1Q8NGK4 314 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 OR4L1Q8NH43 312 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 CFAP61Q8NHU2 1237 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 PHF10Q8WUB8 498 aaKnown RBP6.92□□□□□ -1.3
YBX3-209ENST00000540747 RAD51AP1Q96B01 352 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 LRRC45Q96CN5 670 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 SCMH1Q96GD3 660 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 FRMD6Q96NE9 622 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 DMRTA2Q96SC8 542 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 PLCD4Q9BRC7 762 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 TRIM51Q9BSJ1 452 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 DPH7Q9BTV6 452 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 TUBB6Q9BUF5 446 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.92□□□□□ -1.3
YBX3-209ENST00000540747 MCCC2Q9HCC0 563 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 MKKSQ9NPJ1 570 aaPredicted RBP6.92□□□□□ -1.3
YBX3-209ENST00000540747 TRMT1Q9NXH9 659 aaKnown RBP6.92□□□□□ -1.3
YBX3-209ENST00000540747 SPATA7Q9P0W8 599 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 TRPC4Q9UBN4 977 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 SLC39A10Q9ULF5 831 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 CDC14AQ9UNH5 594 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 RUVBL2Q9Y230 463 aaKnown RBP6.92□□□□□ -1.3
YBX3-209ENST00000540747 RUVBL1Q9Y265 456 aaKnown RBP6.92□□□□□ -1.3
YBX3-209ENST00000540747 MEMO1Q9Y316 297 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 PCDHA13Q9Y5I0 950 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 HEATR5BQ9P2D3 2071 aa6.92□□□□□ -1.3
YBX3-209ENST00000540747 HRNRQ86YZ3 2850 aaPredicted RBP6.91□□□□□ -1.3
YBX3-209ENST00000540747 TCRBV7S2A1N4TA0A589 114 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 ERI2A8K979 691 aaKnown RBP6.91□□□□□ -1.3
YBX3-209ENST00000540747 BTNL10A8MVZ5 291 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 MYO1CO00159 1063 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 P2RX6O15547 441 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 PRPF4O43172 522 aaKnown RBP eCLIP6.91□□□□□ -1.3
YBX3-209ENST00000540747 PSMD3O43242 534 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 TJP3O95049 919 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 EIF2S1P05198 315 aaKnown RBP6.91□□□□□ -1.3
YBX3-209ENST00000540747 HEXBP07686 556 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 ICAM2P13598 275 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 RPS3P23396 243 aaKnown RBP eCLIP6.91□□□□□ -1.3
YBX3-209ENST00000540747 CXCR2P25025 360 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 ADRA1DP25100 572 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 ATP5DP30049 168 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 CCNFP41002 786 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 SMSP52788 366 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 RWDD2BP57060 319 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 AP2B1P63010 937 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 CCZ1BP86790 482 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 CCZ1P86791 482 aaPredicted RBP6.91□□□□□ -1.3
YBX3-209ENST00000540747 RBPJQ06330 500 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 CDH17Q12864 832 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 TUBA3CQ13748 450 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 FAM53BQ14153 422 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 NAA25Q14CX7 972 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 TMED2Q15363 201 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 SYT16Q17RD7 645 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 KRTCAP3Q53RY4 240 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 ZNF766Q5HY98 468 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 CTSL3PQ5NE16 218 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 ABHD17BQ5VST6 288 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 FAAH2Q6GMR7 532 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 TUBA3EQ6PEY2 450 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 NCCRP1Q6ZVX7 275 aaPredicted RBP6.91□□□□□ -1.3
YBX3-209ENST00000540747 LINC00523Q86TU6 105 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 LDB1Q86U70 411 aaPredicted RBP6.91□□□□□ -1.3
YBX3-209ENST00000540747 SPPL2CQ8IUH8 684 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 BEST3Q8N1M1 668 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 CSNK1A1LQ8N752 337 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 CABS1Q96KC9 395 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 BIRC8Q96P09 236 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 SIGLEC12Q96PQ1 595 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 TSSK1BQ9BXA7 367 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 HES7Q9BYE0 225 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 VN1R1Q9GZP7 353 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 TREX1Q9NSU2 369 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 STMN3Q9NZ72 180 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 SH3BGRL2Q9UJC5 107 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 ITGB1BP2Q9UKP3 347 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 TTC7AQ9ULT0 858 aaPredicted RBP6.91□□□□□ -1.3
YBX3-209ENST00000540747 REXO2Q9Y3B8 237 aaKnown RBP6.91□□□□□ -1.3
YBX3-209ENST00000540747 TCAF1Q9Y4C2 921 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 DUSP10Q9Y6W6 482 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 SCN2AQ99250 2005 aa6.91□□□□□ -1.3
YBX3-209ENST00000540747 ABCA4P78363 2273 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 A0A0A6YYC8 382 aaPredicted RBP6.9□□□□□ -1.3
YBX3-209ENST00000540747 GRID2IPA4D2P6 1211 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 ARHGEF33A8MVX0 844 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 AKR1B15C9JRZ8 316 aaPredicted RBP6.9□□□□□ -1.3
YBX3-209ENST00000540747 I3L1I5 382 aaPredicted RBP6.9□□□□□ -1.3
YBX3-209ENST00000540747 ZSCAN12O43309 604 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 CTIFO43310 598 aaKnown RBP6.9□□□□□ -1.3
YBX3-209ENST00000540747 MAN1A2O60476 641 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 NEURL1O76050 574 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 C8orf89P0DMQ9 161 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 ARNTP27540 789 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 CMPK1P30085 196 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 CD96P40200 585 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 CASP6P55212 293 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 MAT1AQ00266 395 aaKnown RBP6.9□□□□□ -1.3
YBX3-209ENST00000540747 TLE4Q04727 773 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 ZNF33BQ06732 778 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms